RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-206	ENST00000441089	SGCD	Q92629	289 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC25A36	Q96CQ1	311 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	DDIT4L	Q96D03	193 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	SFXN2	Q96NB2	322 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR5B2	Q96R09	309 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR14A2	Q96R54	314 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	GPX7	Q96SL4	187 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	PIGQ	Q9BRB3	760 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	TSSK6	Q9BXA6	273 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	SRXN1	Q9BYN0	137 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	POTEKP	Q9BYX7	375 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	FKRP	Q9H9S5	495 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF556	Q9HAH1	456 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	TBC1D23	Q9NUY8	699 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	MED29	Q9NX70	200 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	IL20	Q9NYY1	176 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF229	Q9UJW7	825 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	LRCH1	Q9Y2L9	728 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	PCDHGB1	Q9Y5G3	927 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	GMPPB	Q9Y5P6	360 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	PCNX3	Q9H6A9	2034 aa		4.17	□□□□□ -1.74
PTPN4-206	ENST00000441089	ARFGEF3	Q5TH69	2177 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	HTR3E	A5X5Y0	456 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	C11orf98	E9PRG8	122 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MS4A18	H0YCH9	400 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	C16orf97	H3BN30	126 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	PLPP3	O14495	311 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TNFSF11	O14788	317 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SURF4	O15260	269 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SSX4	O60224	188 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	AKR7A3	O95154	331 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NDUFB2	O95178	105 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MT-ATP6	P00846	226 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ADRA2A	P08913	450 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	HLA-DOB	P13765	273 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF708	P17019	499 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	CDH2	P19022	906 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	USF1	P22415	310 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	APEX1	P27695	318 aa	Known RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	FMO3	P31513	532 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	GRK5	P34947	590 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	UGT2B10	P36537	528 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	CDKN1A	P38936	164 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC9A3	P48764	834 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	DIO1	P49895	249 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MECP2	P51608	486 aa	Known RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MAP2K6	P52564	334 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NUDT6	P53370	316 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	CLDN18	P56856	261 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR2B6	P58173	313 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ERVK-25	P63136	954 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	IL5RA	Q01344	420 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	HGFAC	Q04756	655 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	FOXL1	Q12952	345 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	IL18R1	Q13478	541 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MED21	Q13503	144 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TOMM20	Q15388	145 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SGCB	Q16585	318 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF239	Q16600	458 aa	Known RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MS4A18	Q3C1V0	323 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ADAM5	Q6NVV9	412 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SMARCD3	Q6STE5	483 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	C5orf46	Q6UWT4	87 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMPPE	Q6ZT21	453 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	PTCHD4	Q6ZW05	846 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NANOGNB	Q7Z5D8	188 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	CDK20	Q8IZL9	346 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	KDM8	Q8N371	416 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	LNX2	Q8N448	690 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	C10orf53	Q8N6V4	93 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TMEM99	Q8N816	258 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TCEANC	Q8N8B7	351 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	OR5J2	Q8NH18	312 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	RHOXF1	Q8NHV9	184 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	FAM81A	Q8TBF8	368 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TEX47	Q8TBZ9	253 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF418	Q8TF45	676 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	OSTF1	Q92882	214 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	MRPL24	Q96A35	216 aa	Known RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	RASD2	Q96D21	266 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ZNF845	Q96IR2	970 aa	Predicted RBP	4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	KLHL15	Q96M94	604 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TSPAN32	Q96QS1	320 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	IL4I1	Q96RQ9	567 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	TRIB1	Q96RU8	372 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	DDO	Q99489	341 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	FOXB1	Q99853	325 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	IFT27	Q9BW83	186 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	HCAR1	Q9BXC0	346 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NELFA	Q9H3P2	528 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089		Q9H521	79 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NRIP3	Q9NQ35	241 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	NANS	Q9NR45	359 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	SERINC1	Q9NRX5	453 aa		4.16	□□□□□ -1.74
PTPN4-206	ENST00000441089	ELOVL5	Q9NYP7	299 aa		4.16	□□□□□ -1.74

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