RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 RGP1Q92546 391 aaPredicted RBP2.74□□□□□ -1.97
PFDN4-202ENST00000441080 ELMO1Q92556 727 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 MRGPRFQ96AM1 343 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 GALNT14Q96FL9 552 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 DNAJC1Q96KC8 554 aaKnown RBP2.74□□□□□ -1.97
PFDN4-202ENST00000441080 MICU1Q9BPX6 476 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 SPNS1Q9H2V7 528 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 DDX19AQ9NUU7 478 aaKnown RBP2.74□□□□□ -1.97
PFDN4-202ENST00000441080 HRASLS2Q9NWW9 162 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 LGALS13Q9UHV8 139 aa2.74□□□□□ -1.97
PFDN4-202ENST00000441080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.74□□□□□ -1.97
PFDN4-202ENST00000441080 PCM1Q15154 2024 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 PLA2R1Q13018 1463 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 C9JVG2 144 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 FKBP6O75344 327 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 SSTR5P35346 364 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 SLC1A1P43005 524 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 CDH17Q12864 832 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 SOHLH1Q5JUK2 328 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 ARMC12Q5T9G4 340 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 PRAMEF20Q5VT98 475 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 RAET1LQ5VY80 246 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 IGFL1Q6UW32 110 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 ZYG11AQ6WRX3 759 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
PFDN4-202ENST00000441080 HMGN2P46Q86SG4 172 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 TMEM150AQ86TG1 271 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 ACMSDQ8TDX5 336 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 NEURL3Q96EH8 262 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 NARS2Q96I59 477 aaKnown RBP2.73□□□□□ -1.97
PFDN4-202ENST00000441080 CAMK2N2Q96S95 79 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 CCDC77Q9BR77 488 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 PITPNC1Q9UKF7 332 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 ADAMTS13Q76LX8 1427 aa2.73□□□□□ -1.97
PFDN4-202ENST00000441080 GAKO14976 1311 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 IGLV2-18A0A075B6J9 118 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 TRAV40A0A0B4J280 105 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 OR6C74A6NCV1 312 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 SIRPB1O00241 398 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 LSM1O15116 133 aaKnown RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ZNF207O43670 478 aaKnown RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 RDH16O75452 317 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 GCM2O75603 506 aaPredicted RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 RBBP9O75884 186 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 MPZL1O95297 269 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 PRMT2P55345 433 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 VSX2P58304 361 aaPredicted RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 RAB10P61026 200 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 QPRTQ15274 297 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ZNF726P1Q15940 193 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 MRPL23Q16540 153 aaKnown RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 SNRNP35Q16560 246 aaKnown RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 REEP3Q6NUK4 255 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 MBOAT1Q6ZNC8 495 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 SLC16A14Q7RTX9 510 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 GTPBP8Q8N3Z3 284 aaPredicted RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ARRDC1Q8N5I2 433 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 OR4A4PQ8NGN8 299 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 OR8U1Q8NH10 309 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 PIFOQ8TCI5 191 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ZNF721Q8TF20 911 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 RNF139Q8WU17 664 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ESR2Q92731 530 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 SLC38A4Q969I6 547 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 L3HYPDHQ96EM0 354 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 TIMM17AQ99595 171 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 CTRCQ99895 268 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 ZNF2Q9BSG1 426 aaPredicted RBP2.72□□□□□ -1.97
PFDN4-202ENST00000441080 GGA2Q9UJY4 613 aa2.72□□□□□ -1.97
PFDN4-202ENST00000441080 AKNAQ7Z591 1439 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 IGLV1-36A0A0B4J1U3 117 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 A0A0U1RQV1 116 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 L7N2F9 121 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 YIF1AO95070 293 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 RCBTB2O95199 551 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 APCSP02743 223 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 CD3GP09693 182 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 GGT1P19440 569 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 STXBP1P61764 594 aaKnown RBP2.71□□□□□ -1.98
PFDN4-202ENST00000441080 CCDC183Q5T5S1 534 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 SAXO2Q658L1 398 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 C22orf42Q6IC83 251 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 TMEM205Q6UW68 189 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 BHLHA15Q7RTS1 189 aaPredicted RBP2.71□□□□□ -1.98
PFDN4-202ENST00000441080 CMTM1Q8IZ96 169 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 N4BP2L2Q92802 583 aaPredicted RBP2.71□□□□□ -1.98
PFDN4-202ENST00000441080 ING2Q9H160 280 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 ANKRA2Q9H9E1 313 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 TMEM9BQ9NQ34 198 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 NMRK1Q9NWW6 199 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 HYOU1Q9Y4L1 999 aa2.71□□□□□ -1.98
PFDN4-202ENST00000441080 CABIN1Q9Y6J0 2220 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 NOTCH2Q04721 2471 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 TRBV11-1A0A0K0K1C0 115 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 NDUFAB1O14561 156 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 CCNKO75909 580 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 FTH1P02794 183 aa2.7□□□□□ -1.98
PFDN4-202ENST00000441080 EIF4EP06730 217 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms