RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 IFNGR2P38484 337 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 MNAT1P51948 309 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 TMEM33P57088 247 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 CR1LQ2VPA4 569 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 ZMAT1Q5H9K5 638 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 DNM1P34Q6PK57 102 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 SMARCD3Q6STE5 483 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 DPY19L2P2Q6ZN68 376 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 JAZF1Q86VZ6 243 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 YIPF5Q969M3 257 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 C4orf45Q96LM5 186 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 GPX7Q96SL4 187 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 NRIP3Q9NQ35 241 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 PLEK2Q9NYT0 353 aa16.96■□□□□ 0.31
SHROOM1-204ENST00000440118 IGHV1-69-2A0A0G2JMI3 117 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 SPRY3O43610 288 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 PPP1R3DO95685 299 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 IGHV3-13P01766 116 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 GSTM3P21266 225 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 PCMT1P22061 227 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 MPV17P39210 176 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 CDH15P55291 814 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 AQP6Q13520 282 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 THSD4Q6ZMP0 1018 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 USP51Q70EK9 711 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 GLB1L2Q8IW92 636 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 KLF14Q8TD94 323 aaPredicted RBP16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 GTF3AQ92664 365 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 DHRS1Q96LJ7 313 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 CYSLTR2Q9NS75 346 aa16.95■□□□□ 0.3
SHROOM1-204ENST00000440118 B4DSR2 109 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 CLDN25C9JDP6 229 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 TIMM8AO60220 97 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 PTP4A3O75365 173 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 TFP02787 698 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 NOS3P29474 1203 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 RRM2P31350 389 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 SLC6A6P31641 620 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 SRP14P37108 136 aaKnown RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 HFEQ30201 348 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 MBNL2Q5VZF2 373 aaKnown RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 GLCCI1Q86VQ1 547 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 NPEPL1Q8NDH3 523 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 CLDND2Q8NHS1 167 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 TMEM158Q8WZ71 300 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 ELMOD3Q96FG2 381 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 MARS2Q96GW9 593 aaKnown RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 TIMD4Q96H15 378 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 ERMAPQ96PL5 475 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 IFT27Q9BW83 186 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 EGLN1Q9GZT9 426 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 LPAR2Q9HBW0 351 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 NKIRAS2Q9NYR9 191 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 ASH2LQ9UBL3 628 aa16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 CGGBP1Q9UFW8 167 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 COA3Q9Y2R0 106 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-204ENST00000440118 H3BSA7 217 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 PHF1O43189 567 aaPredicted RBP16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 RENP00797 406 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 SCG5P05408 212 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 LIPAP38571 399 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 SPATS1Q496A3 300 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 AVPI1Q5T686 147 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 C1orf94Q6P1W5 598 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 RINLQ6ZS11 566 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 PIGWQ7Z7B1 504 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 ZER1Q7Z7L7 766 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 NUAK2Q9H093 628 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 VSX1Q9NZR4 365 aaPredicted RBP16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 TMEFF2Q9UIK5 374 aaPredicted RBP16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 GRIP1Q9Y3R0 1128 aa16.93■□□□□ 0.3
SHROOM1-204ENST00000440118 FBN1P35555 2871 aaKnown RBP16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 RP2O75695 350 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 NGFP01138 241 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 SEMG1P04279 462 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 COX5BP10606 129 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 CRABP1P29762 137 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 MVKQ03426 396 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 FAM209AQ5JX71 171 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 OTPQ5XKR4 325 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 LEG1Q6P5S2 330 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 CYP2R1Q6VVX0 501 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 PTCHD4Q6ZW05 846 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 VASH1Q7L8A9 365 aaPredicted RBP16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 ZDHHC21Q8IVQ6 265 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 OR52D1Q9H346 318 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 TREM2Q9NZC2 230 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 CD300AQ9UGN4 299 aa16.92■□□□□ 0.3
SHROOM1-204ENST00000440118 TANC2Q9HCD6 1990 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 IGHV1-46P01743 117 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 FPR3P25089 353 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 CRYBB2P43320 205 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 DVL1P1P54792 670 aaPredicted RBP16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 LSM6P62312 80 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 PGM2L1Q6PCE3 622 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 SHQ1Q6PI26 577 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 OR52L1Q8NGH7 329 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 OR51F2Q8NH61 342 aa16.91■□□□□ 0.3
SHROOM1-204ENST00000440118 RAB39BQ96DA2 213 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms