RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 POLR1DQ9Y2S0 133 aa10.2□□□□□ -0.78
HSPG2-206ENST00000439717 PMF1-BGLAPU3KQ54 211 aa10.2□□□□□ -0.78
HSPG2-206ENST00000439717 LOC100509620A0A075B734 347 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 C5orf49A4QMS7 147 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 FAM171A2A8MVW0 826 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 H7C417 338 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 SURF4O15260 269 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 DOK2O60496 412 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ICMTO60725 284 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 GPANK1O95872 356 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 HLA-DQA2P01906 255 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 TFP02787 698 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 CCL2P13500 99 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF823P16415 610 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PAICSP22234 425 aaKnown RBP10.19□□□□□ -0.78
HSPG2-206ENST00000439717 CDKN1AP38936 164 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 EVX1P49640 407 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 UCP2P55851 309 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ATP5J2P56134 94 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 HIST1H3AP68431 136 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 MEP1BQ16820 701 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 HIST2H3PS2Q5TEC6 136 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF774Q6NX45 483 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ARL9Q6T311 187 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 HIST2H3AQ71DI3 136 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 VASH1Q7L8A9 365 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PAQR4Q8N4S7 273 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-206ENST00000439717 MRPL24Q96A35 216 aaKnown RBP10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PKP2Q99959 881 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 CDADC1Q9BWV3 514 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 CACNG6Q9BXT2 260 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PRRG3Q9BZD7 231 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PLK3Q9H4B4 646 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 BARX1Q9HBU1 254 aaPredicted RBP10.19□□□□□ -0.78
HSPG2-206ENST00000439717 S100A14Q9HCY8 104 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 PLEK2Q9NYT0 353 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ATPIF1Q9UII2 106 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 LHFPL6Q9Y693 200 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 ROS1P08922 2347 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 AKAP6Q13023 2319 aa10.19□□□□□ -0.78
HSPG2-206ENST00000439717 OR6C6A6NF89 314 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 SYNGR3O43761 229 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 GPRIN2O60269 458 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 SPI1P17947 270 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 CCNOP22674 350 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 FMO3P31513 532 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 PYCR1P32322 319 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 GGT2P36268 569 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 HTR5AP47898 357 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 ADAM8P78325 824 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 PTGES3Q15185 160 aaKnown RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 RAB35Q15286 201 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 ZSCAN26Q16670 478 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 CCDC92Q53HC0 331 aaPredicted RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 Q5PR19 223 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 ICA1LQ8NDH6 482 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 OR9Q1Q8NGQ5 310 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 OR2AJ1Q8NGZ0 328 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 OR1F12Q8NHA8 337 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 IPCEF1Q8WWN9 437 aaPredicted RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 PLEKHA8Q96JA3 519 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 DCLRE1CQ96SD1 692 aaKnown RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 DOK1Q99704 481 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 COQ7Q99807 217 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 RBM4BQ9BQ04 359 aaKnown RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 HDHD2Q9H0R4 259 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 ELOVL3Q9HB03 270 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 MRPL22Q9NWU5 206 aaKnown RBP10.18□□□□□ -0.78
HSPG2-206ENST00000439717 CYB5R1Q9UHQ9 305 aa10.18□□□□□ -0.78
HSPG2-206ENST00000439717 CREBBPQ92793 2442 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TMEM129A0AVI4 362 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 SAC3D1A6NKF1 404 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 FAM183AA6NL82 134 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 PRR23D1E9PI22 279 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 RER1O15258 196 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 GLCEO94923 617 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 GYPBP06028 91 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 FAM157BP0CG42 384 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 PRR23D2P0DMB1 279 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 ZNF250P15622 560 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TUBG1P23258 451 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 IGFBP5P24593 272 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 WNT5AP41221 380 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 PPOXP50336 477 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 SELENOVP59797 346 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 PPP2R2BQ00005 443 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 ECH1Q13011 328 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 PCK2Q16822 640 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TEX30Q5JUR7 227 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 ELFN2Q5R3F8 820 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 LINC01590Q5TEZ4 76 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TMEM236Q5W0B7 351 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 OTPQ5XKR4 325 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 RGS7BPQ6MZT1 257 aaPredicted RBP10.17□□□□□ -0.78
HSPG2-206ENST00000439717 SLC18B1Q6NT16 456 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 TGIF2LYQ8IUE0 185 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 KRTAP1-3Q8IUG1 177 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 OR51L1Q8NGJ5 315 aa10.17□□□□□ -0.78
HSPG2-206ENST00000439717 ZNRF4Q8WWF5 429 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms