RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 MESTQ5EB52 335 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 DNM1P34Q6PK57 102 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 PEG10Q86TG7 708 aaKnown RBP16.03■□□□□ 0.16
CCDC78-204ENST00000439619 RSRC1Q96IZ7 334 aaKnown RBP16.03■□□□□ 0.16
CCDC78-204ENST00000439619 RERGLQ9H628 205 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 LPAR2Q9HBW0 351 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 MAGEL2Q9UJ55 1249 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
CCDC78-204ENST00000439619 ANK3Q12955 4377 aaKnown RBP16.03■□□□□ 0.16
CCDC78-204ENST00000439619 TRAV20A0A0B4J274 112 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 SGCEO43556 437 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 TCF21O43680 179 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 TIMM8AO60220 97 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-204ENST00000439619 DOK2O60496 412 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 TNFSF4P23510 183 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 HTR5AP47898 357 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 AQP6Q13520 282 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 ACSM5Q6NUN0 579 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 DPY19L2P2Q6ZN68 376 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 RFPL4BQ6ZWI9 263 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 GLB1L2Q8IW92 636 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 GPX7Q96SL4 187 aaPredicted RBP16.02■□□□□ 0.16
CCDC78-204ENST00000439619 GORASP2Q9H8Y8 452 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 EMC7Q9NPA0 242 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 NRIP3Q9NQ35 241 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 PLEK2Q9NYT0 353 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 SIGLEC7Q9Y286 467 aa16.02■□□□□ 0.16
CCDC78-204ENST00000439619 RTTNQ86VV8 2226 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 UNC119BA6NIH7 251 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 SNX3O60493 162 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 SLC16A7O60669 478 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 IGHV1-46P01743 117 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 CRABP1P29762 137 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 IFNGR2P38484 337 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 MPV17P39210 176 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 MMP15P51511 669 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 SAMD4BQ5PRF9 694 aaKnown RBP16.01■□□□□ 0.15
CCDC78-204ENST00000439619 AVPI1Q5T686 147 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 PGM2L1Q6PCE3 622 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 FAM122BQ7Z309 247 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 RNF148Q8N7C7 305 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 CCL17Q92583 94 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 PYURFQ96I23 114 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 LRRC37BQ96QE4 947 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 SYT4Q9H2B2 425 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 ZNF665Q9H7R5 613 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 NDE1Q9NXR1 346 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 POLR1DQ9Y2S0 133 aa16.01■□□□□ 0.15
CCDC78-204ENST00000439619 FAM157AC9JC47 383 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 SOCS2O14508 198 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 PTP4A3O75365 173 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 GADD45GO95257 159 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 NGFP01138 241 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 ADH4P08319 380 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 CTLA4P16410 223 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 OMPP47874 163 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 LIMS1P48059 325 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 LMO4P61968 165 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 LSM6P62312 80 aaKnown RBP16■□□□□ 0.15
CCDC78-204ENST00000439619 KRTAP24-1Q3LI83 254 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 MTX3Q5HYI7 312 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 FAHD2BQ6P2I3 314 aaPredicted RBP16■□□□□ 0.15
CCDC78-204ENST00000439619 SMARCD3Q6STE5 483 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 OR52J3Q8NH60 311 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 RASD2Q96D21 266 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 FAHD2AQ96GK7 314 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 C7orf34Q96L11 122 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 C19orf24Q9BVV8 132 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 VSX1Q9NZR4 365 aaPredicted RBP16■□□□□ 0.15
CCDC78-204ENST00000439619 WIPI2Q9Y4P8 454 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 IER3IP1Q9Y5U9 82 aa16■□□□□ 0.15
CCDC78-204ENST00000439619 DNHD1Q96M86 4753 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 WNT9BO14905 357 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 HSD17B1P14061 328 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 CENPAP49450 140 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 SPIBQ01892 262 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 TSEN54Q7Z6J9 526 aaKnown RBP15.99■□□□□ 0.15
CCDC78-204ENST00000439619 PGAM4Q8N0Y7 254 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 OR5L1Q8NGL2 311 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 GTF3AQ92664 365 aaKnown RBP15.99■□□□□ 0.15
CCDC78-204ENST00000439619 NSMCE2Q96MF7 247 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 GAL3ST1Q99999 423 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 OCEL1Q9H607 264 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 ASH2LQ9UBL3 628 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 IL20RAQ9UHF4 553 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 TMCC3Q9ULS5 477 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 COA3Q9Y2R0 106 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-204ENST00000439619 V9GYQ6 96 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 STAB1Q9NY15 2570 aa15.99■□□□□ 0.15
CCDC78-204ENST00000439619 YLPM1P49750 1951 aaKnown RBP15.98■□□□□ 0.15
CCDC78-204ENST00000439619 TRBV4-1A0A0J9YWV2 114 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 ISPDA4D126 451 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 ZSCAN5BA6NJL1 495 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 J3QW42 95 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 SURF4O15260 269 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 DIRAS1O95057 198 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 MPZL1O95297 269 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 PNPP00491 289 aa15.98■□□□□ 0.15
CCDC78-204ENST00000439619 ZNF26P17031 533 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms