RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 KCTD20Q7Z5Y7 419 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 OR4F15Q8NGB8 312 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 OR52N5Q8NH56 324 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 HAVCR2Q8TDQ0 301 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 ST7LQ8TDW4 575 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 HSD17B8Q92506 261 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 FBXO17Q96EF6 278 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 SH3GL3Q99963 347 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 HDHD2Q9H0R4 259 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 PAK1IP1Q9NWT1 392 aaPredicted RBP11.09□□□□□ -0.63
SCLT1-202ENST00000439369 CHCHD3Q9NX63 227 aaKnown RBP11.09□□□□□ -0.63
SCLT1-202ENST00000439369 B3GNT2Q9NY97 397 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 ZNF224Q9NZL3 707 aa11.09□□□□□ -0.63
SCLT1-202ENST00000439369 GDF2Q9UK05 429 aaPredicted RBP11.09□□□□□ -0.63
SCLT1-202ENST00000439369 A0A096LPE4 126 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 A0A1W2PPZ6 126 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 FAM90A27PA6NNH2 459 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 PTGES3LE9PB15 166 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 J3QKU1 62 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF254O75437 659 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 SULT1C4O75897 302 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 PTHP01270 115 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 CBR1P16152 277 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 EEF1B2P24534 225 aaKnown RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 TFF3Q07654 80 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 FAM27E3Q08E93 113 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 EIF2B1Q14232 305 aaKnown RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 GALEQ14376 348 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 RAB35Q15286 201 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 GSG1Q2KHT4 349 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 HIKESHIQ53FT3 197 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 PLEKHG7Q6ZR37 379 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 DCXRQ7Z4W1 244 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ALDH16A1Q8IZ83 802 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 SYS1Q8N2H4 156 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 LRRC18Q8N456 261 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 WDR31Q8NA23 367 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 RNF133Q8WVZ7 376 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 MUCL1Q96DR8 90 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ABHD6Q9BV23 337 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 OR2H1Q9GZK4 316 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ACTR6Q9GZN1 396 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 NIPAL2Q9H841 368 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 DDX28Q9NUL7 540 aaKnown RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 ERVK13-1Q9NX77 482 aa11.08□□□□□ -0.64
SCLT1-202ENST00000439369 CRNNQ9UBG3 495 aaPredicted RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 RALYQ9UKM9 306 aaKnown RBP11.08□□□□□ -0.64
SCLT1-202ENST00000439369 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 A0A1W2PQL4 384 aaPredicted RBP11.07□□□□□ -0.64
SCLT1-202ENST00000439369 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 CLEC18AA5D8T8 446 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF878C9JN71 531 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 SGCEO43556 437 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 APOL3O95236 402 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 HLA-HP01893 362 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF32P17041 273 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 CCKARP32238 428 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 DCTDP32321 178 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 RAB1AP62820 205 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 PLP2Q04941 152 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 MRPL28Q13084 256 aaKnown RBP11.07□□□□□ -0.64
SCLT1-202ENST00000439369 ELFN2Q5R3F8 820 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF773Q6PK81 442 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF322Q6U7Q0 402 aaPredicted RBP11.07□□□□□ -0.64
SCLT1-202ENST00000439369 CLEC18BQ6UXF7 455 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 SVOPQ8N4V2 548 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 CLEC18CQ8NCF0 446 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 OR52N1Q8NH53 320 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 S100PBPQ96BU1 408 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 MAP6Q96JE9 813 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 COQ7Q99807 217 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 RHNO1Q9BSD3 238 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 RNF121Q9H920 327 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 NDRG3Q9UGV2 375 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 CAB39Q9Y376 341 aaPredicted RBP11.07□□□□□ -0.64
SCLT1-202ENST00000439369 SNX5Q9Y5X3 404 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 SLC25A15Q9Y619 301 aa11.07□□□□□ -0.64
SCLT1-202ENST00000439369 A0A087WXM4 84 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 IQCMA0A1B0GVH7 501 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 NKX2-6A6NCS4 301 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 OR6C6A6NF89 314 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 RER1O15258 196 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 AGFG2O95081 481 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 IGKV3-15P01624 115 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 APOC1P02654 83 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 KRT8P05787 483 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 TACSTD2P09758 323 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 LIMS3P0CW19 117 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 LIMS4P0CW20 117 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 PSKH1P11801 424 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 CD79AP11912 226 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 OPRL1P41146 370 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 GRB2P62993 217 aaKnown RBP11.06□□□□□ -0.64
SCLT1-202ENST00000439369 PSG4Q00888 419 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 MVKQ03426 396 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 ZNF85Q03923 595 aa11.06□□□□□ -0.64
SCLT1-202ENST00000439369 IRF3Q14653 427 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms