RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 HRGP04196 525 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 ITGB2P05107 769 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 MYL9P24844 172 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 IFITM2Q01629 132 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 SRYQ05066 204 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 MADCAM1Q13477 382 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 KCTD18Q6PI47 426 aaPredicted RBP18.73■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF454Q8N9F8 522 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 OR10AC1Q8NH08 325 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 ATF6BQ99941 703 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 C11orf54Q9H0W9 315 aaPredicted RBP18.73■□□□□ 0.59
PTPRF-207ENST00000436724 MMP28Q9H239 520 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 NEK6Q9HC98 313 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 GTF2A1LQ9UNN4 478 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 BOD1L1Q8NFC6 3051 aa18.73■□□□□ 0.59
PTPRF-207ENST00000436724 OR4C45A6NMZ5 311 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 PIN1P1O15428 100 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 NTF4P34130 210 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 KIR3DL2P43630 455 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 MFGE8Q08431 387 aaPredicted RBP18.72■□□□□ 0.59
PTPRF-207ENST00000436724 PYDC2Q56P42 97 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 WDR38Q5JTN6 314 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 TRILQ7L0X0 811 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 OR10H5Q8NGA6 315 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 OR6N1Q8NGY5 312 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 HAS2Q92819 552 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF486Q96H40 463 aaPredicted RBP18.72■□□□□ 0.59
PTPRF-207ENST00000436724 NOX4Q9NPH5 578 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 GLTPQ9NZD2 209 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 PLA2G10O15496 165 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 AQP8O94778 261 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 GLSO94925 669 aaPredicted RBP18.72■□□□□ 0.59
PTPRF-207ENST00000436724 UCHL1P09936 223 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 GSTT2P0CG29 244 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 GSTT2BP0CG30 244 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 CD46P15529 392 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 YIF1BQ5BJH7 314 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 TEX30Q5JUR7 227 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 OR51A4Q8NGJ6 313 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 RNF128Q8TEB7 428 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 MOV10Q9HCE1 1003 aaKnown RBP18.72■□□□□ 0.59
PTPRF-207ENST00000436724 CYB5R1Q9UHQ9 305 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 ITGB1BP2Q9UKP3 347 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 SLC22A13Q9Y226 551 aa18.72■□□□□ 0.59
PTPRF-207ENST00000436724 KLRC4-KLRK1H3BQV0 150 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 DNPH1O43598 174 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 TLX3O43711 291 aaPredicted RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF432O94892 652 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 APEX1P27695 318 aaKnown RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 CSNK1A1P48729 337 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 LHX2P50458 406 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 SF3B4Q15427 424 aaKnown RBP eCLIP18.71■□□□□ 0.593e-10■■■■■ 45.2
PTPRF-207ENST00000436724 IDNKQ5T6J7 187 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 UNQ9370/PRO34162Q6UXP9 181 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 TMEM123Q8N131 208 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 C4orf45Q96LM5 186 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 DCBLD2Q96PD2 775 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 SLC22A4Q9H015 551 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 PPP1R3EQ9H7J1 279 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 B3GAT2Q9NPZ5 323 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 CENPMQ9NSP4 180 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 MEIOCA2RUB1 952 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF716A6NP11 495 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF879B4DU55 563 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 HPGDSO60760 199 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 GATBO75879 557 aaKnown RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 SOX2P48431 317 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 RIDAP52758 137 aaKnown RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 PPIAP62937 165 aaKnown RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 PPP3R1P63098 170 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 MRPL28Q13084 256 aaKnown RBP18.71■□□□□ 0.59
PTPRF-207ENST00000436724 DEFB109BQ30KR1 87 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF766Q5HY98 468 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ATAD3CQ5T2N8 411 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 ZNF676Q8N7Q3 588 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 TEX19Q8NA77 164 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 N6AMT1Q9Y5N5 214 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 LHFPL6Q9Y693 200 aa18.71■□□□□ 0.59
PTPRF-207ENST00000436724 MGAQ8IWI9 3026 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 A0A0G2JK05 382 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 ANKRD61A6NGH8 418 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 DOK2O60496 412 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 SLC25A35Q3KQZ1 300 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 TMEM53Q6P2H8 277 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 CNIH2Q6PI25 160 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 ABHD3Q8WU67 409 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 ST6GAL2Q96JF0 529 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 SLC25A18Q9H1K4 315 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 ZNF221Q9UK13 617 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 CDV3Q9UKY7 258 aaKnown RBP18.7■□□□□ 0.58
PTPRF-207ENST00000436724 FLVCR1Q9Y5Y0 555 aa18.7■□□□□ 0.58
PTPRF-207ENST00000436724 DCDC2BA2VCK2 349 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 ARL6IP5O75915 188 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 RCVRNP35243 200 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 TNFSF10P50591 281 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 CLDN18P56856 261 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 HSD17B12Q53GQ0 312 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 RNFT1Q5M7Z0 435 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 PAMR1Q6UXH9 720 aa18.69■□□□□ 0.58
PTPRF-207ENST00000436724 CFAP77Q6ZQR2 320 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms