RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 AGTR1P30556 359 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 TPBGQ13641 420 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 EIF2B1Q14232 305 aaKnown RBP9.93□□□□□ -0.82
LINC00539-203ENST00000434601 KCNMB1Q16558 191 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF684Q5T5D7 378 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 LIPKQ5VXJ0 399 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 PLEKHG7Q6ZR37 379 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 VASH1Q7L8A9 365 aaPredicted RBP9.93□□□□□ -0.82
LINC00539-203ENST00000434601 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.93□□□□□ -0.82
LINC00539-203ENST00000434601 ZFP41Q8N8Y5 198 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 THEM6Q8WUY1 208 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 GMPPAQ96IJ6 420 aaPredicted RBP9.93□□□□□ -0.82
LINC00539-203ENST00000434601 DOK1Q99704 481 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 BCL7BQ9BQE9 202 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 TTYH2Q9BSA4 534 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 EMC7Q9NPA0 242 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 POLE4Q9NR33 117 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 GLRX2Q9NS18 164 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 ACOXLQ9NUZ1 547 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 NDUFB11Q9NX14 153 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 BABAM2Q9NXR7 383 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 SH3BGRL2Q9UJC5 107 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 GNG8Q9UK08 70 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 POLR1DQ9Y2S0 133 aa9.93□□□□□ -0.82
LINC00539-203ENST00000434601 CSMD2Q7Z408 3487 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 HIVEP1P15822 2718 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 SETD2Q9BYW2 2564 aaPredicted RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 PNMA8CA0A1B0GUJ8 204 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 METTL15A6NJ78 407 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 HSPB2A8KAH6 182 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 H3BMQ9 156 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 PSMD9O00233 223 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 TMCC2O75069 709 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 SULT1C4O75897 302 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 ABHD16AO95870 558 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 OR8G3PP0DMU2 310 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 MSR1P21757 451 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 GADD45AP24522 165 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 SSTR2P30874 369 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 CDAP32320 146 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 GUCA1AP43080 201 aaPredicted RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 GBX2P52951 348 aaPredicted RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 LSM6P62312 80 aaKnown RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 MRPL28Q13084 256 aaKnown RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 SF3B4Q15427 424 aaKnown RBP eCLIP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 HSPB2Q16082 182 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 CNPY1Q3B7I2 92 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 TIMM50Q3ZCQ8 353 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 TSPO2Q5TGU0 170 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF585AQ6P3V2 769 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 LINGO2Q7L985 606 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 KCTD20Q7Z5Y7 419 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 EGFL6Q8IUX8 553 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 LINC00346Q8IVM7 164 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 PHC2Q8IXK0 858 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 OR52N5Q8NH56 324 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 HAVCR2Q8TDQ0 301 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 NABP1Q96AH0 204 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 APH1AQ96BI3 265 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 C12orf43Q96C57 262 aaKnown RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 PELI1Q96FA3 418 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 LURAP1Q96LR2 239 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 OR8B4Q96RC9 309 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 AMELYQ99218 206 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 ABHD6Q9BV23 337 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 CDADC1Q9BWV3 514 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 RBM24Q9BX46 236 aaKnown RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 NELFAQ9H3P2 528 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 GPR35Q9HC97 309 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 CYB5R1Q9UHQ9 305 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 MRM2Q9UI43 246 aaKnown RBP9.92□□□□□ -0.82
LINC00539-203ENST00000434601 IKZF2Q9UKS7 526 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 ZNF835Q9Y2P0 537 aa9.92□□□□□ -0.82
LINC00539-203ENST00000434601 CD8B2A6NJW9 211 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 MAGEB4O15481 346 aaPredicted RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 AIREO43918 545 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 WDR1O75083 606 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 KRT33AO76009 404 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 CLDN14O95500 239 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 WNT11O96014 354 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 TPOP07202 933 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 TACSTD2P09758 323 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 GABRA1P14867 456 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 CELP19835 753 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 NR4A1P22736 598 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 EDNRAP25101 427 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 GABRA5P31644 462 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 MRPS34P82930 218 aaKnown RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ROR2Q01974 943 aaKnown RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 ROM1Q03395 351 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 STK11Q15831 433 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 SGCAQ16586 387 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 CTF1Q16619 201 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 CEACAM16Q2WEN9 425 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 NSUN5P2Q63ZY6 315 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 OR2A2Q6IF42 318 aa9.91□□□□□ -0.82
LINC00539-203ENST00000434601 KCTD18Q6PI47 426 aaPredicted RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 NUFIP2Q7Z417 695 aaKnown RBP9.91□□□□□ -0.82
LINC00539-203ENST00000434601 DCXRQ7Z4W1 244 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms