RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 LEG1Q6P5S2 330 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 BTNL3Q6UXE8 466 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 COMTD1Q86VU5 262 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 RNF113BQ8IZP6 322 aaKnown RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 CELF2-AS1Q8N7Q2 184 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SIGLECL1Q8N7X8 197 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 OR5L1Q8NGL2 311 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SLC25A40Q8TBP6 338 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 LRRC8CQ8TDW0 803 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SLC26A7Q8TE54 656 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 NABP1Q96AH0 204 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 HAVCR1Q96D42 359 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 FAM71F1Q96KD3 344 aaPredicted RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 PRSS27Q9BQR3 290 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SIKE1Q9BRV8 207 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 PARD6BQ9BYG5 372 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 OR2H1Q9GZK4 316 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 MS4A7Q9GZW8 240 aaPredicted RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 CENPHQ9H3R5 247 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 KAT8Q9H7Z6 458 aaKnown RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 UNKLQ9H9P5 680 aaKnown RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 NANOGQ9H9S0 305 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 BEX1Q9HBH7 125 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 MEPEQ9NQ76 525 aaPredicted RBP6.98□□□□□ -1.29
CDH13-203ENST00000431540 CCDC167Q9P0B6 97 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SLAMF8Q9P0V8 285 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 SLC7A7Q9UM01 511 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 FZR1Q9UM11 496 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 ZNF281Q9Y2X9 895 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 NDUFAF1Q9Y375 327 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 POMT1Q9Y6A1 747 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 TRRAPQ9Y4A5 3859 aa6.98□□□□□ -1.29
CDH13-203ENST00000431540 LOC100509620A0A075B734 347 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 KIR2DS1A0A191URI9 304 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 A0A1B0GWJ7 208 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 LRRN3E7EW58 273 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 TRAPPC2LH3BP13 241 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 TIMM23O14925 209 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 NDUFA7O95182 113 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 THY1P04216 161 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 SBK2P0C263 348 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 UMPSP11172 480 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 CCL2P13500 99 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ZFP36P26651 326 aaKnown RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 PCGF2P35227 344 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 WNT5AP41221 380 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 SLC9A3P48764 834 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 IDH3AP50213 366 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 NPY4RP50391 375 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 RPL27P61353 136 aaKnown RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 LSM6P62312 80 aaKnown RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 LCN2P80188 198 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 TNFAIP6P98066 277 aaPredicted RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 PAX2Q02962 417 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 SCRN3Q0VDG4 424 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 PSG7Q13046 419 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 SLC9A3R2Q15599 337 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ERICH5Q6P6B1 374 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 MAVSQ7Z434 540 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ZNF101Q8IZC7 436 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 C1orf87Q8N0U7 546 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 LRRC18Q8N456 261 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 OR52E2Q8NGJ4 325 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 OR4F5Q8NH21 305 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 RAB40AQ8WXH6 277 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 TLCD1Q96CP7 247 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 SGTBQ96EQ0 304 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 TSPAN32Q96QS1 320 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ZNF347Q96SE7 839 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 CGREF1Q99674 301 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 CPPED1Q9BRF8 314 aaPredicted RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 OR2J1Q9GZK6 312 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ARMCX1Q9P291 453 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 ZNF69Q9UC07 566 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.97□□□□□ -1.29
CDH13-203ENST00000431540 OR5V1Q9UGF6 321 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 EGFL7Q9UHF1 273 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 PPP1R3CQ9UQK1 317 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 MED31Q9Y3C7 131 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 UGT2A1Q9Y4X1 527 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 NOTCH1P46531 2555 aa6.97□□□□□ -1.29
CDH13-203ENST00000431540 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 LRRC30A6NM36 301 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 CPSF4LA6NMK7 179 aaKnown RBP6.96□□□□□ -1.3
CDH13-203ENST00000431540 SRRM5B3KS81 715 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 SPRY3O43610 288 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 NDUFA2O43678 99 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 SERPINI2O75830 405 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 MAKP20794 623 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 MSR1P21757 451 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 CCNOP22674 350 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 SRP9P49458 86 aaKnown RBP6.96□□□□□ -1.3
CDH13-203ENST00000431540 ERVS71-1P61550 626 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 ST3GAL3Q11203 375 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 CYLC2Q14093 348 aaPredicted RBP6.96□□□□□ -1.3
CDH13-203ENST00000431540 PDCD1Q15116 288 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 SGCAQ16586 387 aa6.96□□□□□ -1.3
CDH13-203ENST00000431540 CYP51A1Q16850 503 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms