RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ESPL1Q14674 2120 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF587BE7ETH6 402 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 GABARAPO95166 117 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 RNF224P0DH78 156 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 EDNRAP25101 427 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 OR3A2P47893 321 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 GBX2P52951 348 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 SGCAQ16586 387 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 CEACAM16Q2WEN9 425 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 NRN1LQ496H8 165 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 C1orf185Q5T7R7 199 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 SLC16A12Q6ZSM3 486 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 DCXRQ7Z4W1 244 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ABHD12BQ7Z5M8 362 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF679Q8IYX0 411 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF837Q96EG3 531 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 AMELYQ99218 206 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 NAA50Q9GZZ1 169 aaKnown RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 SIAEQ9HAT2 523 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 TMEM38BQ9NVV0 291 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 UPB1Q9UBR1 384 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 MRM2Q9UI43 246 aaKnown RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 POLR1DQ9Y2S0 133 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 LHFPL6Q9Y693 200 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ABHD16AO95870 558 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 EIF2S3LQ2VIR3 472 aaKnown RBP16.04■□□□□ 0.16
HMGN1-206ENST00000431390 CCDC58Q4VC31 144 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 FAM27BQ5VT28 67 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 LIPKQ5VXJ0 399 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 RTL6Q6ICC9 239 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 DEGS2Q6QHC5 323 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 GFRALQ6UXV0 394 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 RHOUQ7L0Q8 258 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 GALNT11Q8NCW6 608 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 OR2AJ1Q8NGZ0 328 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 SSC4DQ8WTU2 575 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 FOXB1Q99853 325 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 C1orf198Q9H425 327 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 ACOXLQ9NUZ1 547 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 MALT1Q9UDY8 824 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 IKZF2Q9UKS7 526 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 SVILO95425 2214 aa16.04■□□□□ 0.16
HMGN1-206ENST00000431390 MAGEB4O15481 346 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-206ENST00000431390 OR8G3PP0DMU2 310 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 TGM4P49221 684 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 ENDOGQ14249 297 aaKnown RBP16.03■□□□□ 0.16
HMGN1-206ENST00000431390 TIMM50Q3ZCQ8 353 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 PRR30Q53SZ7 412 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-206ENST00000431390 KRT77Q7Z794 578 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 YIPF7Q8N8F6 280 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 OR6K3Q8NGY3 331 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 RNF133Q8WVZ7 376 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 ZFP3Q96NJ6 502 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF416Q9BWM5 594 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 MROQ9BYG7 248 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 C12orf49Q9H741 205 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 SLCO1C1Q9NYB5 712 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 GDF2Q9UK05 429 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF835Q9Y2P0 537 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 FAM215AQ9Y5M1 114 aa16.03■□□□□ 0.16
HMGN1-206ENST00000431390 FREM1Q5H8C1 2179 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 E9PI62 339 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 PSMD9O00233 223 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 PRRG2O14669 202 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 OGG1O15527 345 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 PLPP2O43688 288 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF254O75437 659 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 IGHV3-9P01782 118 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 CD1AP06126 327 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 CRHP06850 196 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 EDN3P14138 238 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 CD53P19397 219 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 CELP19835 753 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 PSMA1P25786 263 aaKnown RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 GABRA5P31644 462 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 GTF2A1P52655 376 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 SIRPAP78324 504 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 AQP6Q13520 282 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 LIPNQ5VXI9 398 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 FBXW9Q5XUX1 488 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 RPL22L1Q6P5R6 122 aaKnown RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 CORO6Q6QEF8 472 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF627Q7L945 461 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 GCNT2Q8N0V5 402 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 ZFP41Q8N8Y5 198 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 C12orf43Q96C57 262 aaKnown RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 MAP6Q96JE9 813 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 WACQ9BTA9 647 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 ASH2LQ9UBL3 628 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 ST6GALNAC2Q9UJ37 374 aa16.02■□□□□ 0.16
HMGN1-206ENST00000431390 SF3B6Q9Y3B4 125 aaKnown RBP16.02■□□□□ 0.16
HMGN1-206ENST00000431390 NOTCH2Q04721 2471 aa16.02■□□□□ 0.15
HMGN1-206ENST00000431390 A1L4Q6 167 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 H3BMQ9 156 aa16.01■□□□□ 0.15
HMGN1-206ENST00000431390 CNOT4O95628 575 aaKnown RBP16.01■□□□□ 0.15
HMGN1-206ENST00000431390 CST2P09228 141 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms