RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 CLDN12P56749 244 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 HSPB2Q16082 182 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 SLC25A47Q6Q0C1 308 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 STAC2Q6ZMT1 411 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 UBE2J2Q8N2K1 259 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 IL17RDQ8NFM7 739 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 OR2M7Q8NG81 312 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 OR9K2Q8NGE7 335 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 GPR148Q8TDV2 347 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 PHYHIPQ92561 330 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 TCF7L1Q9HCS4 588 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 CYB5R1Q9UHQ9 305 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 ZNF407Q9C0G0 2248 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 LAMA5O15230 3695 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 PTPRBP23467 1997 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 ARGFXA6NJG6 315 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 SMAD9O15198 467 aaKnown RBP14.8□□□□□ -0.04
USHBP1-203ENST00000431146 PTTG1O95997 202 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 ADRA2CP18825 462 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 RBMS1P29558 406 aaKnown RBP14.8□□□□□ -0.04
USHBP1-203ENST00000431146 HIST3H3Q16695 136 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 FDX2Q6P4F2 183 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 CFAP77Q6ZQR2 320 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 ESPNLQ6ZVH7 1005 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 LRRC28Q86X40 367 aaPredicted RBP14.8□□□□□ -0.04
USHBP1-203ENST00000431146 CATSPERDQ86XM0 798 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 DTX1Q86Y01 620 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 OR10S1Q8NGN2 331 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 NAA11Q9BSU3 229 aaPredicted RBP14.8□□□□□ -0.04
USHBP1-203ENST00000431146 ZCCHC4Q9H5U6 513 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 CYSLTR2Q9NS75 346 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 POLR1DQ9Y2S0 133 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 LHFPL6Q9Y693 200 aa14.8□□□□□ -0.04
USHBP1-203ENST00000431146 DNAJC13O75165 2243 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 PRRC2CQ9Y520 2896 aaKnown RBP14.79□□□□□ -0.04
USHBP1-203ENST00000431146 URB1O60287 2271 aaKnown RBP14.79□□□□□ -0.04
USHBP1-203ENST00000431146 GJE1A6NN92 205 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 CDRT15L2A8MXV6 281 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 GPR171O14626 319 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 CXCL13O43927 109 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 SRSF10O75494 262 aaKnown RBP14.79□□□□□ -0.04
USHBP1-203ENST00000431146 H2BFMP0C1H6 154 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 SELENOPP49908 381 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 HDDC2Q7Z4H3 204 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 NRARPQ7Z6K4 114 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 SULF2Q8IWU5 870 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 OR6N1Q8NGY5 312 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 ZNF671Q8TAW3 534 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 LGALS14Q8TCE9 139 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 ROBO4Q8WZ75 1007 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 KIAA1143Q96AT1 154 aaPredicted RBP14.79□□□□□ -0.04
USHBP1-203ENST00000431146 SLAMF6Q96DU3 332 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 OR2M2Q96R28 347 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 ABI3Q9P2A4 366 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 BOKQ9UMX3 212 aaPredicted RBP14.79□□□□□ -0.04
USHBP1-203ENST00000431146 RTTNQ86VV8 2226 aa14.79□□□□□ -0.04
USHBP1-203ENST00000431146 FAM166BA8MTA8 275 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 PRKAR1AP10644 381 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 POU3F2P20265 443 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 MAPK3P27361 379 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CCR9P51686 369 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CLDN15P56746 228 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CARD18P57730 90 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 C6orf183Q5T699 404 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CCBE1Q6UXH8 406 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 RNF133Q8WVZ7 376 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 KCNE4Q8WWG9 221 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 FER1L6-AS2Q96M78 137 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 NEDD4LQ96PU5 975 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 FAM173AQ9BQD7 235 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 GLTPQ9NZD2 209 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 GDF2Q9UK05 429 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 R4GMQ9 66 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 TRBV5-7A0A0A0MS05 114 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 TMEM269A0A1B0GVZ9 245 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 IFITM5A6NNB3 132 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 NPR2P20594 1047 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CSNK1A1P48729 337 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 RAC3P60763 192 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 SCN1BQ07699 218 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CDC20Q12834 499 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CARTPTQ16568 116 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 METAP1DQ6UB28 335 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 CADM3Q8N126 398 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 GALNT16Q8N428 558 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 ZIC4Q8N9L1 334 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 OR10D3Q8NH80 312 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 NKX3-1Q99801 234 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 G6PC2Q9NQR9 355 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 RYDENQ9NUL5 291 aaKnown RBP14.78□□□□□ -0.04
USHBP1-203ENST00000431146 ASH2LQ9UBL3 628 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 V9GY05 133 aa14.78□□□□□ -0.04
USHBP1-203ENST00000431146 FRYQ5TBA9 3013 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 PDCD5O14737 125 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 TLX3O43711 291 aaPredicted RBP14.77□□□□□ -0.04
USHBP1-203ENST00000431146 ZNF432O94892 652 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 TALDO1P37837 337 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 RFX2P48378 723 aa14.77□□□□□ -0.04
USHBP1-203ENST00000431146 AGFG1P52594 562 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms