RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	RNF148	Q8N7C7	305 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	ABHD4	Q8TB40	342 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	RASD2	Q96D21	266 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	NDEL1	Q9GZM8	345 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	ELOVL3	Q9HB03	270 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	EMC7	Q9NPA0	242 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	ADA2	Q9NZK5	511 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	VSX1	Q9NZR4	365 aa	Predicted RBP	15.07	■□□□□ 0
MRPL28-203	ENST00000429738	KLHL21	Q9UJP4	597 aa		15.07	■□□□□ 0
MRPL28-203	ENST00000429738	NDRG4	Q9ULP0	352 aa	Known RBP	15.07	■□□□□ 0
MRPL28-203	ENST00000429738	IGHV1-69-2	A0A0G2JMI3	117 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	DIRAS1	O95057	198 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	TXNDC12	O95881	172 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	IGHV1-46	P01743	117 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	HSD17B1	P14061	328 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	COMP	P49747	757 aa	Predicted RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	SCRN3	Q0VDG4	424 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	KRR1	Q13601	381 aa	Known RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	FGD3	Q5JSP0	725 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	RINL	Q6ZS11	566 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	USP51	Q70EK9	711 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	GLCCI1	Q86VQ1	547 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	TMEM186	Q96B77	213 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	ZMYND19	Q96E35	227 aa	Predicted RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	RSRC1	Q96IZ7	334 aa	Known RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	GPA33	Q99795	319 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	FAM107B	Q9H098	131 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	SYT4	Q9H2B2	425 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	METTL17	Q9H7H0	456 aa	Predicted RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	SAP30L	Q9HAJ7	183 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	DECR2	Q9NUI1	292 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	TBCCD1	Q9NVR7	557 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	TREM2	Q9NZC2	230 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	CGGBP1	Q9UFW8	167 aa	Predicted RBP	15.06	■□□□□ 0
MRPL28-203	ENST00000429738	CD300A	Q9UGN4	299 aa		15.06	■□□□□ 0
MRPL28-203	ENST00000429738	ZSCAN5B	A6NJL1	495 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	IMPA2	O14732	288 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	MSMB	P08118	114 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	EGR1	P18146	543 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	LIPA	P38571	399 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	TST	Q16762	297 aa	Known RBP	15.05	■□□□□ -0
MRPL28-203	ENST00000429738	DPY19L2P2	Q6ZN68	376 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	PTCHD4	Q6ZW05	846 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	VASH1	Q7L8A9	365 aa	Predicted RBP	15.05	■□□□□ -0
MRPL28-203	ENST00000429738	ADCK1	Q86TW2	530 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	PGAM4	Q8N0Y7	254 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	SEMA6D	Q8NFY4	1073 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	SGMS2	Q8NHU3	365 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	PYURF	Q96I23	114 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	NSRP1	Q9H0G5	558 aa	Known RBP	15.05	■□□□□ -0
MRPL28-203	ENST00000429738	CYSLTR2	Q9NS75	346 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	HIF1AN	Q9NWT6	349 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	MAGEL2	Q9UJ55	1249 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	CACNG2	Q9Y698	323 aa		15.05	■□□□□ -0
MRPL28-203	ENST00000429738	PLSCR5	A0PG75	271 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	SGCE	O43556	437 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	SPRY3	O43610	288 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	DOK2	O60496	412 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	DEAF1	O75398	565 aa	Predicted RBP	15.04	■□□□□ -0
MRPL28-203	ENST00000429738	GMNN	O75496	209 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	TUBG1	P23258	451 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	ARHGDIA	P52565	204 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	LSM6	P62312	80 aa	Known RBP	15.04	■□□□□ -0
MRPL28-203	ENST00000429738	AQP6	Q13520	282 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	ARL9	Q6T311	187 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	ZER1	Q7Z7L7	766 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	OR52J3	Q8NH60	311 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	ELMOD3	Q96FG2	381 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	KRCC1	Q9NPI7	259 aa	Predicted RBP	15.04	■□□□□ -0
MRPL28-203	ENST00000429738	TUBG2	Q9NRH3	451 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	IL20RA	Q9UHF4	553 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	AURKC	Q9UQB9	309 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	COA3	Q9Y2R0	106 aa	Predicted RBP	15.04	■□□□□ -0
MRPL28-203	ENST00000429738	WIPI2	Q9Y4P8	454 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	IER3IP1	Q9Y5U9	82 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	MEGF8	Q7Z7M0	2845 aa		15.04	■□□□□ -0
MRPL28-203	ENST00000429738	UNC119B	A6NIH7	251 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	CLDN25	C9JDP6	229 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	SLC16A7	O60669	478 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	KHDRBS3	O75525	346 aa	Known RBP	15.03	■□□□□ -0
MRPL28-203	ENST00000429738	UBOX5	O94941	541 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	ABHD16A	O95870	558 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	CD55	P08174	381 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	CDKN2A	P42771	156 aa	Known RBP	15.03	■□□□□ -0
MRPL28-203	ENST00000429738	HTR5A	P47898	357 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	MVK	Q03426	396 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	PSG7	Q13046	419 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	SCGB2A2	Q13296	93 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	KCNMB1	Q16558	191 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	HFE	Q30201	348 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	AVPI1	Q5T686	147 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	SMARCD3	Q6STE5	483 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	CPLX4	Q7Z7G2	160 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	GLB1L2	Q8IW92	636 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	C3orf56	Q8N813	242 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	NPEPL1	Q8NDH3	523 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	OR51F2	Q8NH61	342 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	DIRC2	Q96SL1	478 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	NUAK2	Q9H093	628 aa		15.03	■□□□□ -0
MRPL28-203	ENST00000429738	POFUT1	Q9H488	388 aa		15.03	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms