RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 NAA10P41227 235 aaPredicted RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 GDI2P50395 445 aaKnown RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 ADARB1P78563 741 aaKnown RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 PSG4Q00888 419 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 SNCBQ16143 134 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 OCLNQ16625 522 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 TBC1D28Q2M2D7 210 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 SLC25A30Q5SVS4 291 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 ZNF691Q5VV52 312 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 CORO6Q6QEF8 472 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 B3GLCTQ6Y288 498 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 SHFQ7M4L6 423 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 ENTHD1Q8IYW4 607 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 SLC30A7Q8NEW0 376 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 UBE2FQ969M7 185 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 CNN2Q99439 309 aaKnown RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 CDH20Q9HBT6 801 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 WARS2Q9UGM6 360 aaKnown RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 CYB5R1Q9UHQ9 305 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
VARS2-203ENST00000428017 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.17□□□□□ -0.39e-8■□□□□ 9
VARS2-203ENST00000428017 LHFPL6Q9Y693 200 aa13.17□□□□□ -0.3
VARS2-203ENST00000428017 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 RER1O15258 196 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 SIAH2O43255 324 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 SELENOFO60613 162 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 ENTPD6O75354 484 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 CLIC3O95833 236 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
VARS2-203ENST00000428017 ZNF14P17017 642 aaPredicted RBP13.16□□□□□ -0.3
VARS2-203ENST00000428017 CCNOP22674 350 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 STOMP27105 288 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 APEX1P27695 318 aaKnown RBP13.16□□□□□ -0.3
VARS2-203ENST00000428017 HTR1FP30939 366 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 HTR5AP47898 357 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 GALK2Q01415 458 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 NAAAQ02083 359 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 POU4F2Q12837 409 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 TMED1Q13445 227 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 EIF2B1Q14232 305 aaKnown RBP13.16□□□□□ -0.3
VARS2-203ENST00000428017 RAB35Q15286 201 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 TEX30Q5JUR7 227 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 C6orf52Q5T4I8 152 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 SLC18B1Q6NT16 456 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 ADAM5Q6NVV9 412 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 TMEM154Q6P9G4 183 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 DPY19L4Q7Z388 723 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 ZNF454Q8N9F8 522 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 RHOXF1Q8NHV9 184 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 HDHD2Q9H0R4 259 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 WNT5BQ9H1J7 359 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 RASSF4Q9H2L5 321 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 CLEC4MQ9H2X3 399 aaPredicted RBP13.16□□□□□ -0.3
VARS2-203ENST00000428017 MARCH7Q9H992 704 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 HSPE1-MOB4S4R3N1 261 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
VARS2-203ENST00000428017 ANKHD1Q8IWZ3 2542 aaKnown RBP13.15□□□□□ -0.3
VARS2-203ENST00000428017 CTAG2O75638 210 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 RPS27P42677 84 aaKnown RBP13.15□□□□□ -0.3
VARS2-203ENST00000428017 ECH1Q13011 328 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 GGTLC2Q14390 218 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 TAF13Q15543 124 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 ELFN2Q5R3F8 820 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
VARS2-203ENST00000428017 VASH1Q7L8A9 365 aaPredicted RBP13.15□□□□□ -0.3
VARS2-203ENST00000428017 SLC16A9Q7RTY1 509 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 DCXRQ7Z4W1 244 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 TIGD4Q8IY51 512 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 CPEB3Q8NE35 698 aaKnown RBP13.15□□□□□ -0.3
VARS2-203ENST00000428017 OR51G2Q8NGK0 314 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 TFAP2CQ92754 450 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 HS3ST6Q96QI5 342 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 ICE1Q9Y2F5 2266 aa13.15□□□□□ -0.3
VARS2-203ENST00000428017 IGHV2OR16-5A0A0B4J2B6 119 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 ATP6V1G2-DDX39BF2Z307 99 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 COX5BP10606 129 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 MTNR1AP48039 350 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 SPOCK1Q08629 439 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 MAD2L1BPQ15013 274 aaPredicted RBP13.14□□□□□ -0.31
VARS2-203ENST00000428017 PCK2Q16822 640 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 CCDC92Q53HC0 331 aaPredicted RBP13.14□□□□□ -0.31
VARS2-203ENST00000428017 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 ARL9Q6T311 187 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 UNQ6126/PRO20091Q6UXV3 157 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 CFAP77Q6ZQR2 320 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 HIST2H3AQ71DI3 136 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 MYPOPQ86VE0 399 aaPredicted RBP13.14□□□□□ -0.31
VARS2-203ENST00000428017 ZNF584Q8IVC4 421 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 ZNF295-AS1Q8N0V1 137 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 OR4F15Q8NGB8 312 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 THEM6Q8WUY1 208 aa13.14□□□□□ -0.31
VARS2-203ENST00000428017 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms