RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 OR1J2Q8NGS2 313 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 OR1J1Q8NGS3 322 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 C11orf40Q8WZ69 217 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 SLC7A6Q92536 515 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 GTF3AQ92664 365 aaKnown RBP11.69□□□□□ -0.54
SNX3-204ENST00000426155 NIPSNAP1Q9BPW8 284 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
SNX3-204ENST00000426155 RPRD1BQ9NQG5 326 aaKnown RBP11.69□□□□□ -0.54
SNX3-204ENST00000426155 TBC1D23Q9NUY8 699 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 ASH2LQ9UBL3 628 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 POMPQ9Y244 141 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 TIMM10BQ9Y5J6 103 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 ABCA1O95477 2261 aa11.69□□□□□ -0.54
SNX3-204ENST00000426155 A0A1W2PPW3 197 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 AQP12BA6NM10 295 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 C12orf71A8MTZ7 269 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 VSTM5A8MXK1 200 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 LYNX1G3V0Z9 82 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 M0R233 179 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 BHLHE40O14503 412 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 ARPC3O15145 178 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 GSC2O15499 205 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 DOK2O60496 412 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 NGFP01138 241 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 TP53P04637 393 aaPredicted RBP11.68□□□□□ -0.54
SNX3-204ENST00000426155 LYNX1P0DP58 116 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 NAT2P11245 290 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 NOS3P29474 1203 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 MPV17P39210 176 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 GDI2P50395 445 aaKnown RBP11.68□□□□□ -0.54
SNX3-204ENST00000426155 UCP2P55851 309 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 PCBD1P61457 104 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNX3-204ENST00000426155 AQP12AQ8IXF9 295 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 HS3ST5Q8IZT8 346 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 CYB561A3Q8NBI2 242 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 OR10G2Q8NGC3 310 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 OR52E2Q8NGJ4 325 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 OR4Q3Q8NH05 313 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 LRMDAQ9H2I8 198 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 POFUT1Q9H488 388 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 ARMC1Q9NVT9 282 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 REV1Q9UBZ9 1251 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 B9D1Q9UPM9 204 aa11.68□□□□□ -0.54
SNX3-204ENST00000426155 RER1O15258 196 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 SYNGR3O43761 229 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 NCR1O76036 304 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 RENP00797 406 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 DAOP14920 347 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 HOXB4P17483 251 aaPredicted RBP11.67□□□□□ -0.54
SNX3-204ENST00000426155 HTR5AP47898 357 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 PDLIM4P50479 330 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 AQP6Q13520 282 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 CORO6Q6QEF8 472 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 LYPD4Q6UWN0 246 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 RASSF6Q6ZTQ3 369 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 VASH1Q7L8A9 365 aaPredicted RBP11.67□□□□□ -0.54
SNX3-204ENST00000426155 LINC00471Q8N535 108 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 OR52L1Q8NGH7 329 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 ABHD4Q8TB40 342 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 SYNPRQ8TBG9 265 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 ZNRF4Q8WWF5 429 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 IPCEF1Q8WWN9 437 aaPredicted RBP11.67□□□□□ -0.54
SNX3-204ENST00000426155 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 RAB1BQ9H0U4 201 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 PLEK2Q9NYT0 353 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 IL20Q9NYY1 176 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 POLR1DQ9Y2S0 133 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 LHFPL6Q9Y693 200 aa11.67□□□□□ -0.54
SNX3-204ENST00000426155 SONP18583 2426 aaKnown RBP11.67□□□□□ -0.54
SNX3-204ENST00000426155 NAV3Q8IVL0 2385 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 IGLV3-9A0A075B6K5 115 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 TCRBV3S1A0A5B6 114 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 VWC2LB2RUY7 222 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 INAFM1C9JVW0 142 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 SGCEO43556 437 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 FKBP6O75344 327 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 TFP02787 698 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 HPXP02790 462 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 DBHP09172 617 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 PSKH1P11801 424 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 ZNF250P15622 560 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 PCSK6P29122 969 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 CRABP1P29762 137 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 PYCR1P32322 319 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 RAD52P43351 418 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 MAGEB1P43366 347 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 EVX1P49640 407 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 KLF3P57682 345 aaPredicted RBP11.66□□□□□ -0.54
SNX3-204ENST00000426155 DSCR9P59020 149 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 SCRN3Q0VDG4 424 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 GGTLC2Q14390 218 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 NKPD1Q17RQ9 610 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 CCDC92Q53HC0 331 aaPredicted RBP11.66□□□□□ -0.54
SNX3-204ENST00000426155 DNM1P34Q6PK57 102 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 SYT9Q86SS6 491 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 LINC00346Q8IVM7 164 aa11.66□□□□□ -0.54
SNX3-204ENST00000426155 ALDH16A1Q8IZ83 802 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms