RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 EIF1AXP47813 144 aaKnown RBP13.35□□□□□ -0.27
CALD1-206ENST00000424922 DAP3P51398 398 aaKnown RBP13.35□□□□□ -0.27
CALD1-206ENST00000424922 CLDN15P56746 228 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 RAC3P60763 192 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ZNF239Q16600 458 aaKnown RBP13.35□□□□□ -0.27
CALD1-206ENST00000424922 ZNF684Q5T5D7 378 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 HACD4Q5VWC8 232 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 RSBN1Q5VWQ0 802 aaPredicted RBP13.35□□□□□ -0.27
CALD1-206ENST00000424922 LRRC69Q6ZNQ3 347 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 SLC16A9Q7RTY1 509 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 WDFY1Q8IWB7 410 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ASB10Q8WXI3 467 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ADGRG7Q96K78 797 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 OXGR1Q96P68 337 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ALG12Q9BV10 488 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 MMP28Q9H239 520 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ACKR4Q9NPB9 350 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 KLHL13Q9P2N7 655 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 MALT1Q9UDY8 824 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 COPS3Q9UNS2 423 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 LIPGQ9Y5X9 500 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 PIEZO2Q9H5I5 2752 aa13.35□□□□□ -0.27
CALD1-206ENST00000424922 ARPC4-TTLL3A0A0A6YYG9 625 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 PRSS37A4D1T9 235 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 DCTN6O00399 190 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 LYRM1O43325 122 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 CXCL13O43927 109 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 LHX2P50458 406 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 RPS11P62280 158 aaKnown RBP eCLIP13.34□□□□□ -0.27
CALD1-206ENST00000424922 SRYQ05066 204 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 MRPL28Q13084 256 aaKnown RBP13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR6K6Q8NGW6 343 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR2V1Q8NHB1 315 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 MNTQ99583 582 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 NAA11Q9BSU3 229 aaPredicted RBP13.34□□□□□ -0.27
CALD1-206ENST00000424922 EMC6Q9BV81 110 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 LDAHQ9H6V9 325 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 MARCH7Q9H992 704 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 DCAF16Q9NXF7 216 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 GNG8Q9UK08 70 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 CACNA1CQ13936 2221 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 MAP1BP46821 2468 aaKnown RBP13.34□□□□□ -0.27
CALD1-206ENST00000424922 ATMQ13315 3056 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 TRBV2A0A0J9YWF9 115 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 MKRN2OSH3BPM6 223 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 K7EM74 188 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 TFECO14948 347 aaPredicted RBP13.34□□□□□ -0.27
CALD1-206ENST00000424922 ZNF43P17038 809 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 EDNRAP25101 427 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 HLA-DMAP28067 261 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 AGFG1P52594 562 aaKnown RBP13.34□□□□□ -0.27
CALD1-206ENST00000424922 BIDP55957 195 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR10A3P58181 314 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 NHLRC1Q6VVB1 395 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 OR4M1Q8NGD0 313 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 CMTM3Q96MX0 182 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 EXO5Q9H790 373 aa13.34□□□□□ -0.27
CALD1-206ENST00000424922 A6NIZ1 184 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 B8ZZF3 427 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 EIF4EP06730 217 aaKnown RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 PITPNBP48739 271 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 INPP1P49441 399 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 CLDN18P56856 261 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 RAP1BP61224 184 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 RAP1AP62834 184 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 ZNF169Q14929 603 aaPredicted RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 PLET1Q6UQ28 207 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 SLC38A6Q8IZM9 456 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 SAMD12Q8N8I0 201 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 TRMT10AQ8TBZ6 339 aaKnown RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 TSPAN10Q9H1Z9 355 aaPredicted RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 ZDHHC11Q9H8X9 412 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 ACOXLQ9NUZ1 547 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 GTF3C1Q12789 2109 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 A0A0G2JMP0 313 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 A0A0X1KG70 313 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 LOC102725191A0A1B0GVB3 256 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 SLC22A23A1A5C7 686 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 SMAD9O15198 467 aaKnown RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 DNPH1O43598 174 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 TRAF3IP2O43734 574 aaPredicted RBP13.33□□□□□ -0.28
CALD1-206ENST00000424922 TACSTD2P09758 323 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 ZNF708P17019 499 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 PLA2G5P39877 138 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 ATAD3CQ5T2N8 411 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 PDSS1Q5T2R2 415 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 LYPD4Q6UWN0 246 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 OR4M2Q8NGB6 313 aa13.33□□□□□ -0.28
CALD1-206ENST00000424922 OR13C5Q8NGS8 318 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms