RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 FCRL6Q6DN72 434 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ZNF585AQ6P3V2 769 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ADGRE4PQ86SQ3 457 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 OR4N2Q8NGD1 307 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 RNF128Q8TEB7 428 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 SUSD6Q92537 303 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TAAR9Q96RI9 348 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CAPN10Q9HC96 672 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 MRPS33Q9Y291 106 aaKnown RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 COL4A2P08572 1712 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TRPM6Q9BX84 2022 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 HEATR5AQ86XA9 2040 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 MUC22E2RYF6 1773 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 ZNF729A6NN14 1252 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 GRXCR1A8MXD5 290 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 FBXO24O75426 580 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CXCL10P02778 98 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 LYL1P12980 280 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CD80P33681 288 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CX3CR1P49238 355 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TGIF1Q15583 401 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 FBXO42Q6P3S6 717 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 BTNL8Q6UX41 500 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 DEFB128Q7Z7B8 93 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TMEFF1Q8IYR6 380 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 KREMEN2Q8NCW0 462 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 AQP3Q92482 292 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 C3orf49Q96BT1 292 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CDC6Q99741 560 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 SYT4Q9H2B2 425 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 CGGBP1Q9UFW8 167 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 SLC22A13Q9Y226 551 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 COLEC10Q9Y6Z7 277 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 DOCK9Q9BZ29 2069 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 NPIPB9F8W1W9 429 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 PPIHO43447 177 aaKnown RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 GPANK1O95872 356 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TXNDC12O95881 172 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 AKR1C4P17516 323 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 IGFBP3P17936 291 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 ACKR3P25106 362 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 EIF2S3P41091 472 aaKnown RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 CTXN1P60606 82 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ITPRIPL2Q3MIP1 535 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 SLC22A6Q4U2R8 563 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 MESTQ5EB52 335 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TMEM151BQ8IW70 566 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 BHLHE23Q8NDY6 225 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 PPP1R14AQ96A00 147 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 AQP10Q96PS8 301 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 ZNF587Q96SQ5 575 aaPredicted RBP9.63□□□□□ -0.87
USP54-204ENST00000422491 SULT4A1Q9BR01 284 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TIMM29Q9BSF4 260 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 NUDT9Q9BW91 350 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TUBA4BQ9H853 241 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 DPP7Q9UHL4 492 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 KCNG2Q9UJ96 466 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 INSL6Q9Y581 213 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 DMRT1Q9Y5R6 373 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 TMEM14AQ9Y6G1 99 aa9.63□□□□□ -0.87
USP54-204ENST00000422491 CACNA1CQ13936 2221 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 MPDZO75970 2070 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 A6NLC8 198 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 PHYHO14832 338 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 FOXS1O43638 330 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 GPR75O95800 540 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 PNPP00491 289 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ZNF14P17017 642 aaPredicted RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 CD1CP29017 333 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 CYCSP99999 105 aaKnown RBP9.62□□□□□ -0.87
USP54-204ENST00000422491 ZNF141Q15928 474 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 SGCAQ16586 387 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 AKIRIN2Q53H80 203 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ALG10Q5BKT4 473 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 DGAT2L6Q6ZPD8 337 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 FJX1Q86VR8 437 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 GVQW1Q8N7I0 195 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR52R1Q8NGF1 315 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 TCTEX1D2Q8WW35 142 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 ASB5Q8WWX0 329 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 KIRREL1Q96J84 757 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 AKR1E2Q96JD6 320 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 MOGAT1Q96PD6 335 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR5B2Q96R09 309 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR2A5Q96R48 311 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 INTS14Q96SY0 518 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 SLC5A7Q9GZV3 580 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 RPS10P5Q9NQ39 176 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 RNF186Q9NXI6 227 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 TAS2R4Q9NYW5 299 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 OR5AC2Q9NZP5 309 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 SLC27A6Q9Y2P4 619 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 LRP3O75074 770 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 F13BP05160 661 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 GUSBP08236 651 aa9.62□□□□□ -0.87
USP54-204ENST00000422491 IFI6P09912 130 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms