RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF676Q8N7Q3 588 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 CPT1CQ8TCG5 803 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 SMAP2Q8WU79 429 aaPredicted RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 SNRNP27Q8WVK2 155 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TSEN15Q8WW01 171 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ABHD17AQ96GS6 310 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 C4orf45Q96LM5 186 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 GPR137Q96N19 417 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ZFP3Q96NJ6 502 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TRIB1Q96RU8 372 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TIMP4Q99727 224 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TM9SF2Q99805 663 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF649Q9BS31 505 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ABHD6Q9BV23 337 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 RBM24Q9BX46 236 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 HDHD2Q9H0R4 259 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 OR51E2Q9H255 320 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 NIPAL2Q9H841 368 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ISG20L2Q9H9L3 353 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 CALHM2Q9HA72 323 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 EMC7Q9NPA0 242 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM38BQ9NVV0 291 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 BABAM2Q9NXR7 383 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 GALNT8Q9NY28 637 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 LUZP4Q9P127 313 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ASH2LQ9UBL3 628 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 UPB1Q9UBR1 384 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 MRM2Q9UI43 246 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 ST6GALNAC2Q9UJ37 374 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 GDF2Q9UK05 429 aaPredicted RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 GRIP1Q9Y3R0 1128 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 UGT2A1Q9Y4X1 527 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 LRP12Q9Y561 859 aa5.27□□□□□ -1.57
HMGB3-202ENST00000419110 TLN1Q9Y490 2541 aaKnown RBP5.27□□□□□ -1.57
HMGB3-202ENST00000419110 SPTA1P02549 2419 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 TRDV1A0A1B0GX56 115 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CD8B2A6NJW9 211 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PSMD9O00233 223 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CASKO14936 926 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PLPP2O43688 288 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 DOK2O60496 412 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ARL6IP5O75915 188 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 WNT11O96014 354 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 APOC1P02654 83 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CD2P06729 351 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 TPOP07202 933 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 YES1P07947 543 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CST2P09228 141 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 FAM87AP0C7U9 286 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CD8BP10966 210 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PSKH1P11801 424 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 GABRA1P14867 456 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 B4GALT1P15291 398 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 HOXC12P31275 282 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 FGF9P31371 208 aaPredicted RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 UGT2B10P36537 528 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PSMB10P40306 273 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PER3P56645 1201 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SIRPAP78324 504 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ROR2Q01974 943 aaKnown RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 RBPJQ06330 500 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ALKBH1Q13686 389 aaKnown RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 DOC2BQ14184 412 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ETFDHQ16134 617 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SGCAQ16586 387 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CEACAM16Q2WEN9 425 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 NRN1LQ496H8 165 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 YIF1BQ5BJH7 314 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 C1orf185Q5T7R7 199 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 LIPNQ5VXI9 398 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 DMKNQ6E0U4 476 aaPredicted RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 C22orf42Q6IC83 251 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CD200R1LQ6Q8B3 271 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 DEGS2Q6QHC5 323 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 C19orf48Q6RUI8 117 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 NHLRC1Q6VVB1 395 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 RPTNQ6XPR3 784 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF813Q6ZN06 617 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 CFAP77Q6ZQR2 320 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SPATC1Q76KD6 591 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 FGD2Q7Z6J4 655 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 COMMD2Q86X83 199 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.26□□□□□ -1.57
HMGB3-202ENST00000419110 WDFY1Q8IWB7 410 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 UBE2J2Q8N2K1 259 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ZIC4Q8N9L1 334 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 GJC3Q8NFK1 279 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 OR6K3Q8NGY3 331 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 OR5AK2Q8NH90 309 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 RPS4Y2Q8TD47 263 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ST7LQ8TDW4 575 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 RNF133Q8WVZ7 376 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 AP3S1Q92572 193 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM203Q969S6 136 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 NABP1Q96AH0 204 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 SLAMF6Q96DU3 332 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 PGLYRP3Q96LB9 341 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 TAAR6Q96RI8 345 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 FOXB1Q99853 325 aa5.26□□□□□ -1.57
HMGB3-202ENST00000419110 ATF6BQ99941 703 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms