RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 KIAA0513O60268 411 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 HPGDSO60760 199 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 INHBAP08476 426 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CYP4B1P13584 511 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 UCHL3P15374 230 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 NPR2P20594 1047 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 HOXA5P20719 270 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 NR2F2P24468 414 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 STOMP27105 288 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 HSD11B1P28845 292 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 KCNJ3P48549 501 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 RORCP51449 518 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 WNT4P56705 351 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 MLF1P58340 268 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CDC42P60953 191 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 NCS1P62166 190 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SNRPFP62306 86 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 DLK1P80370 383 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 COL10A1Q03692 680 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 EMX1Q04741 257 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 GAB1Q13480 694 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CSHL1Q14406 222 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 FGFBP1Q14512 234 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 MESDQ14696 234 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 OR8G1Q15617 311 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 PSG3Q16557 428 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 KCTD19Q17RG1 926 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 C2orf76Q3KRA6 126 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 GLYR1Q49A26 553 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SYTL3Q4VX76 610 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SPATA46Q5T0L3 261 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 RTL6Q6ICC9 239 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SPINK14Q6IE38 97 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 C1orf94Q6P1W5 598 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 FIGLAQ6QHK4 219 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 LCLAT1Q6UWP7 414 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 LRRN1Q6UXK5 716 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CASP12Q6UXS9 341 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 RBMS3Q6XE24 437 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 TMPRSS11AQ6ZMR5 421 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC26A11Q86WA9 606 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 VRK3Q8IV63 474 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 DCUN1D3Q8IWE4 304 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 PDZD9Q8IXQ8 264 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC22A15Q8IZD6 547 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 Q8NFD4 153 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 OR2M7Q8NG81 312 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 OR5M9Q8NGP3 310 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 GPR150Q8NGU9 434 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 OR13D1Q8NGV5 346 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CD300LFQ8TDQ1 290 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CENPIQ92674 756 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 THRSPQ92748 146 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 UCN3Q969E3 161 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SLAMF9Q96A28 289 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC35C1Q96A29 364 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CMTM7Q96FZ5 175 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 EEF2KMTQ96G04 330 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 WDYHV1Q96HA8 205 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 LRR1Q96L50 414 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 NEDD4LQ96PU5 975 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 INTS14Q96SY0 518 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 H2AFJQ9BTM1 129 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 COMMD4Q9H0A8 199 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 THAP2Q9H0W7 228 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 TUBA4BQ9H853 241 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 EML4Q9HC35 981 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 TMEM138Q9NPI0 162 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 PARPBPQ9NWS1 579 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 MED29Q9NX70 200 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 ANKRD10Q9NXR5 420 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 SCN3BQ9NY72 215 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 HCN3Q9P1Z3 774 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 STEAP1Q9UHE8 339 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CD84Q9UIB8 345 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 STARD10Q9Y365 291 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 CLDN16Q9Y5I7 305 aa4.86□□□□□ -1.63
ECHDC1-206ENST00000417628 PHF3Q92576 2039 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SEC16AO15027 2179 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MEIKINA0A087WXM9 373 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 IGHV1-45A0A0A0MS14 117 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 CENPVL1A0A0U1RR11 272 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 GXYLT2A0PJZ3 443 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 MEX3AA1L020 520 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 METTL21EPA6NDL7 271 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 URADA6NGE7 173 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FAM90A20PA6NIJ5 464 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 ERI2A8K979 691 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 VWC2LB2RUY7 222 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 F5H0A9 414 aaPredicted RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 NPIPA3F8WFD2 350 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 H3BMH7 237 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 KLRC4-KLRK1H3BQV0 150 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 RPL36A-HNRNPH2H7BZ11 118 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 SLC16A3O15427 465 aaKnown RBP4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 OGG1O15527 345 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 FABP7O15540 132 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 KDELR3O43731 214 aa4.85□□□□□ -1.63
ECHDC1-206ENST00000417628 AIREO43918 545 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms