RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 HGFACQ04756 655 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 DUSP8Q13202 625 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 KIAA0141Q14154 515 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF658BQ4V348 819 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 LEG1Q6P5S2 330 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 PAQR4Q8N4S7 273 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 COX18Q8N8Q8 333 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 MS4A6EQ96DS6 147 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF764Q96H86 408 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ALG12Q9BV10 488 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 COMMD4Q9H0A8 199 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CHRNA9Q9UGM1 479 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CACFD1Q9UGQ2 172 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TEX13DA0A0J9YY54 714 aaPredicted RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CLEC3AO75596 197 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 LYPD3O95274 346 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 GSK3AP49840 483 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 STARD6P59095 220 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ELOCQ15369 112 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TRMT12Q53H54 448 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 RNASE10Q5GAN6 216 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ABHD17CQ6PCB6 329 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF584Q8IVC4 421 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 YAF2Q8IY57 180 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 LINC01555Q8NAE3 123 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ADAD2Q8NCV1 583 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF417Q8TAU3 575 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CD300LFQ8TDQ1 290 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 DPEP2Q9H4A9 486 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 PRDM7Q9NQW5 492 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 CYTL1Q9NRR1 136 aa13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 MRM2Q9UI43 246 aaKnown RBP13.29□□□□□ -0.28
NCKIPSD-204ENST00000416649 TBC1D3KA0A087X1G2 549 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 F8VVB4 439 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 F8VWA3 439 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 PPIHO43447 177 aaKnown RBP13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 NID1P14543 1247 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZBTB25P24278 435 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 ITGA3P26006 1051 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 RPS10P46783 165 aaKnown RBP13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 SEMA6DQ8NFY4 1073 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR2L2Q8NH16 312 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 ST7LQ8TDW4 575 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 SUSD6Q92537 303 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 NRSN2Q9GZP1 204 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 GFOD1Q9NXC2 390 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 DCAF16Q9NXF7 216 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 IGKV1-8A0A0C4DH67 115 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 NPIPB9F8W1W9 429 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 H7C1C5 153 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 MBTPS2O43462 519 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 PMP2P02689 132 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR8U9P0C7N5 309 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 CSNK1EP49674 416 aaKnown RBP13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 LCN6P62502 163 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 GAB4Q2WGN9 574 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 ACTBL2Q562R1 376 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 DCST2Q5T1A1 773 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 EEF1A1P5Q5VTE0 462 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 MTSS1LQ765P7 747 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 ZNF619Q8N2I2 560 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR8U1Q8NH10 309 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 SPACA1Q9HBV2 294 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 FLRT3Q9NZU0 649 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 CGGBP1Q9UFW8 167 aaPredicted RBP13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 KCNG2Q9UJ96 466 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 CES1P1Q9UKY3 287 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 RTTNQ86VV8 2226 aa13.28□□□□□ -0.28
NCKIPSD-204ENST00000416649 A0A1B0GV50 99 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 A0A1W2PPC1 479 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 A0A1W2PPV9 198 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 TBC1D3FA6NER0 549 aaPredicted RBP13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 BLOC1S5-TXNDC5H3BN57 136 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 DOK2O60496 412 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 SNRNP200O75643 2136 aaKnown RBP13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 CD1AP06126 327 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 DBIP07108 87 aaKnown RBP13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 GJA4P35212 333 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 CASP6P55212 293 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 ARHGAP11BQ3KRB8 267 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 SLC22A6Q4U2R8 563 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 TBC1D3GQ6DHY5 549 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 PAPD4Q6PIY7 484 aaKnown RBP13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 ARRDC1Q8N5I2 433 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 GVQW1Q8N7I0 195 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 ACBD4Q8NC06 268 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 NPEPL1Q8NDH3 523 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 OR6N2Q8NGY6 317 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 GPR148Q8TDV2 347 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 DTD2Q96FN9 168 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 CMKLR1Q99788 373 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 RAB33BQ9H082 229 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 WIF1Q9Y5W5 379 aa13.27□□□□□ -0.28
NCKIPSD-204ENST00000416649 LOC100289279A0A1B0GTE1 492 aa13.27□□□□□ -0.29
NCKIPSD-204ENST00000416649 DCDC2BA2VCK2 349 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms