RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SLC16A14Q7RTX9 510 aa11.78□□□□□ -0.52
SCN1B-202ENST00000415950 OR4N2Q8NGD1 307 aa11.78□□□□□ -0.52
SCN1B-202ENST00000415950 OR2A1Q8NGT9 310 aa11.78□□□□□ -0.52
SCN1B-202ENST00000415950 C1orf123Q9NWV4 160 aa11.78□□□□□ -0.52
SCN1B-202ENST00000415950 OR51B4Q9Y5P0 310 aa11.78□□□□□ -0.52
SCN1B-202ENST00000415950 LEUTXA8MZ59 168 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 D6RAR5 112 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 SDCBPO00560 298 aaPredicted RBP11.77□□□□□ -0.52
SCN1B-202ENST00000415950 GJA4P35212 333 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 EEF1A2Q05639 463 aaKnown RBP11.77□□□□□ -0.52
SCN1B-202ENST00000415950 ZNF74Q16587 644 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 TMEM81Q6P7N7 255 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 MDGA2Q7Z553 956 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 MFSD9Q8NBP5 474 aa11.77□□□□□ -0.52
SCN1B-202ENST00000415950 MYOFQ9NZM1 2061 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-202ENST00000415950 SELENOPP49908 381 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 PMPCAQ10713 525 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 FAM78AQ5JUQ0 283 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 GLIPR1L1Q6UWM5 242 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 FJX1Q86VR8 437 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 TERB2Q8NHR7 220 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 TIMM29Q9BSF4 260 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 ENKD1Q9H0I2 346 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 NXT1Q9UKK6 140 aaKnown RBP11.77□□□□□ -0.53
SCN1B-202ENST00000415950 IGHV3-64DA0A0J9YX35 117 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 RGS13O14921 159 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 NME2P1O60361 137 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF728P0DKX0 622 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 GDF1P27539 372 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 DUSP3P51452 185 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-202ENST00000415950 HMGA2P52926 109 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 CAMK2BQ13554 666 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 CDK5R1Q15078 307 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF628Q5EBL2 1059 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 CNEP1R1Q8N9A8 125 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 OR2AK2Q8NG84 335 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 NUDCD2Q8WVJ2 157 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-202ENST00000415950 SLC25A21Q9BQT8 299 aaPredicted RBP11.77□□□□□ -0.53
SCN1B-202ENST00000415950 OBP2BQ9NPH6 170 aa11.77□□□□□ -0.53
SCN1B-202ENST00000415950 RAB27BO00194 218 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 HCRTR1O43613 425 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 PMS2P2O95744 297 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 PRSS42Q7Z5A4 293 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 BHLHE23Q8NDY6 225 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 WDFY2Q96P53 400 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 LMAN1LQ9HAT1 526 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 TRAPPC2LQ9UL33 140 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MDC1Q14676 2089 aaKnown RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MN1Q10571 1320 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 TMED7-TICAM2A0A0A6YYA0 188 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 OR5H14A6NHG9 310 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 ALOX5APP20292 161 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 AVPR2P30518 371 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 BAMBIQ13145 260 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GPNMBQ14956 572 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 OR4S1Q8NGB4 309 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 FBXW5Q969U6 566 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 ALG14Q96F25 216 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MOKQ9UQ07 419 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 TMED7Q9Y3B3 224 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GJE1A6NN92 205 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF354AO60765 605 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GPANK1O95872 356 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 SPI1P17947 270 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 RAB11AP62491 216 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 OR4C16Q8NGL9 310 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GIMAP5Q96F15 307 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 LINC00052Q96N35 136 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 NKX6-2Q9C056 277 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MCOLN1Q9GZU1 580 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 DLL4Q9NR61 685 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 ZNF629Q9UEG4 869 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 LOC100289279A0A1B0GTE1 492 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 H0Y8G0 127 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 POU3F2P20265 443 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 PRPH2P23942 346 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GCH1P30793 250 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 FGF9P31371 208 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 GABRA2P47869 451 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 SNRPNP63162 240 aaKnown RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 CDK5Q00535 292 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 SMIM19Q96E16 107 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 SAT2Q96F10 170 aaPredicted RBP11.76□□□□□ -0.53
SCN1B-202ENST00000415950 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 C12orf57Q99622 126 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 KCNJ15Q99712 375 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
SCN1B-202ENST00000415950 POMT2Q9UKY4 750 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms