RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 CD163Q86VB7 1156 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 LRRC18Q8N456 261 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZFP41Q8N8Y5 198 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 NABP1Q96AH0 204 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SMIM19Q96E16 107 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 COMMD4Q9H0A8 199 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR51E2Q9H255 320 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ACOXLQ9NUZ1 547 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 ASH2LQ9UBL3 628 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 LHFPL6Q9Y693 200 aa12.56□□□□□ -0.4
HMGA1P1-201ENST00000415560 E9PI62 339 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ERVH48-1M5A8F1 160 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNHIT1O43257 154 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 IGHV3-9P01782 118 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 EDN3P14138 238 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 MPGP29372 298 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 UGT2B10P36537 528 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 GDI2P50395 445 aaKnown RBP12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 CCR9P51686 369 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 RPS25P62851 125 aaKnown RBP12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 TUBA1BP68363 451 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ARF1P84077 181 aaKnown RBP12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC3A1Q07837 685 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 CTF1Q16619 201 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 OTPQ5XKR4 325 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 FDX2Q6P4F2 183 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 USP43Q70EL4 1123 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 SPATC1Q76KD6 591 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 DPPA2Q7Z7J5 298 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 C9orf106Q8NAJ2 232 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMED9Q9BVK6 235 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 SF3B6Q9Y3B4 125 aaKnown RBP12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 LRP12Q9Y561 859 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 TIMM10BQ9Y5J6 103 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ARHGAP21Q5T5U3 1957 aa12.55□□□□□ -0.4
HMGA1P1-201ENST00000415560 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 RGS9O75916 674 aaPredicted RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ABHD16AO95870 558 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 PSKH1P11801 424 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 B4GALT1P15291 398 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 FGF9P31371 208 aaPredicted RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 OPRL1P41146 370 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 CRYBB2P43320 205 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 CASP6P55212 293 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 VBP1P61758 197 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ECH1Q13011 328 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ENDOGQ14249 297 aaKnown RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR7E24Q6IFN5 339 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF627Q7L945 461 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 GCNT2Q8N0V5 402 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ABHD4Q8TB40 342 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 THRSPQ92748 146 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 GHSRQ92847 366 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMEM203Q969S6 136 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF837Q96EG3 531 aaPredicted RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 WBP1Q96G27 269 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 MAP6Q96JE9 813 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 AMELYQ99218 206 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 RNF121Q9H920 327 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 PLSCR4Q9NRQ2 329 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 PTTG2Q9NZH5 202 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 MALT1Q9UDY8 824 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 PRSS50Q9UI38 385 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 PROCRQ9UNN8 238 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 ZNF281Q9Y2X9 895 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 GRIP1Q9Y3R0 1128 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 SIRT4Q9Y6E7 314 aaPredicted RBP12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 R4GMQ9 66 aa12.54□□□□□ -0.4
HMGA1P1-201ENST00000415560 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMEM269A0A1B0GVZ9 245 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 TMEM212A6NML5 194 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 PRR32B1ATL7 298 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 RER1O15258 196 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 GPX5O75715 221 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 GATBO75879 557 aaKnown RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ATE1O95260 518 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 HIST1H3AP68431 136 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 DOC2BQ14184 412 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 GUSBP1Q15486 140 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 ELFN2Q5R3F8 820 aa12.53□□□□□ -0.4
HMGA1P1-201ENST00000415560 HIST2H3PS2Q5TEC6 136 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms