RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 TMPRSS11FQ6ZWK6 438 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 FAM122BQ7Z309 247 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 RNF148Q8N7C7 305 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.19□□□□□ -0.3
ACTB-202ENST00000414620 SLC7A13Q8TCU3 470 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 SLC7A6Q92536 515 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 TIMD4Q96H15 378 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 GAL3ST1Q99999 423 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 ELAC2Q9BQ52 826 aaKnown RBP13.19□□□□□ -0.3
ACTB-202ENST00000414620 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 DCAF16Q9NXF7 216 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 ABCD2Q9UBJ2 740 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 RPS6KA6Q9UK32 745 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 NDRG4Q9ULP0 352 aaKnown RBP13.19□□□□□ -0.3
ACTB-202ENST00000414620 TMEM5Q9Y2B1 443 aa13.19□□□□□ -0.3
ACTB-202ENST00000414620 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 TRAV20A0A0B4J274 112 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 SGCEO43556 437 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 PLPP2O43688 288 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 DEAF1O75398 565 aaPredicted RBP13.18□□□□□ -0.3
ACTB-202ENST00000414620 VENTXO95231 258 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 AVPP01185 164 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 C1orf94Q6P1W5 598 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.18□□□□□ -0.3
ACTB-202ENST00000414620 SYT9Q86SS6 491 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 RAB1CQ92928 201 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 RSRC1Q96IZ7 334 aaKnown RBP13.18□□□□□ -0.3
ACTB-202ENST00000414620 NDEL1Q9GZM8 345 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 EGLN1Q9GZT9 426 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 SYT4Q9H2B2 425 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 ANKRD19PQ9H560 264 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 UBAP1Q9NZ09 502 aa13.18□□□□□ -0.3
ACTB-202ENST00000414620 COA3Q9Y2R0 106 aaPredicted RBP13.18□□□□□ -0.3
ACTB-202ENST00000414620 FAM32AQ9Y421 112 aaKnown RBP13.18□□□□□ -0.3
ACTB-202ENST00000414620 SLC16A7O60669 478 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 UBOX5O94941 541 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 NDUFB2O95178 105 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 GPANK1O95872 356 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 ANPEPP15144 967 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 OMPP47874 163 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 LIMS1P48059 325 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 TNFAIP6P98066 277 aaPredicted RBP13.17□□□□□ -0.3
ACTB-202ENST00000414620 PSG7Q13046 419 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 SEC23BQ15437 767 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 MTX3Q5HYI7 312 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 GLYATQ6IB77 296 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 C1orf229Q6ZS94 237 aaPredicted RBP13.17□□□□□ -0.3
ACTB-202ENST00000414620 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 VASH1Q7L8A9 365 aaPredicted RBP13.17□□□□□ -0.3
ACTB-202ENST00000414620 FAM156AQ8NDB6 213 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 OR52J3Q8NH60 311 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 DCLRE1CQ96SD1 692 aaKnown RBP13.17□□□□□ -0.3
ACTB-202ENST00000414620 MED4Q9NPJ6 270 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 CYSLTR2Q9NS75 346 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 ADA2Q9NZK5 511 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 NDUFAF4Q9P032 175 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 AURKCQ9UQB9 309 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 SIGLEC7Q9Y286 467 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 IER3IP1Q9Y5U9 82 aa13.17□□□□□ -0.3
ACTB-202ENST00000414620 STAB1Q9NY15 2570 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 H3BSA7 217 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 NDUFAB1O14561 156 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 ICMTO60725 284 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 KHDRBS3O75525 346 aaKnown RBP13.16□□□□□ -0.3
ACTB-202ENST00000414620 COX5BP10606 129 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 ADRA2CP18825 462 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 GSTM3P21266 225 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 SDHAP31040 664 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 LIPAP38571 399 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 CENPAP49450 140 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 ERFP50548 548 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 FXYD6P3P58550 94 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 AQP6Q13520 282 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 ARL9Q6T311 187 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 NPEPL1Q8NDH3 523 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 SEMA6DQ8NFY4 1073 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 TMPRSS13Q9BYE2 586 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 MYLK2Q9H1R3 596 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 NRIP3Q9NQ35 241 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 ASH2LQ9UBL3 628 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
ACTB-202ENST00000414620 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
ACTB-202ENST00000414620 ZDHHC8Q9ULC8 765 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 POLR1DQ9Y2S0 133 aa13.16□□□□□ -0.3
ACTB-202ENST00000414620 A0A0G2JMP0 313 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 A0A0X1KG70 313 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 A0A1W2PRQ8 180 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 UNC119BA6NIH7 251 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 PTP4A3O75365 173 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 PPP1R3DO95685 299 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 DBHP09172 617 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 RHCEP18577 417 aa13.15□□□□□ -0.3
ACTB-202ENST00000414620 EPHA1P21709 976 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms