RNA–Protein interactions for RNA: ENST00000414009.1

HPS1-205, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-205ENST00000414009 ASH2LQ9UBL3 628 aa12.78□□□□□ -0.36
HPS1-205ENST00000414009 EIF3KQ9UBQ5 218 aaKnown RBP12.78□□□□□ -0.36
HPS1-205ENST00000414009 TMEFF2Q9UIK5 374 aaPredicted RBP12.78□□□□□ -0.36
HPS1-205ENST00000414009 NDRG4Q9ULP0 352 aaKnown RBP12.78□□□□□ -0.36
HPS1-205ENST00000414009 PLEKHA6Q9Y2H5 1048 aa12.78□□□□□ -0.36
HPS1-205ENST00000414009 AKAP6Q13023 2319 aa12.77□□□□□ -0.36
HPS1-205ENST00000414009 NOTCH2Q04721 2471 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 FAM183AA6NL82 134 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 DOK2O60496 412 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 GPANK1O95872 356 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ALPLP05186 524 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 GYPBP06028 91 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 GAAP10253 952 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ANPEPP15144 967 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 STOMP27105 288 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 APEX1P27695 318 aaKnown RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 RPS7P62081 194 aaKnown RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 ADAM8P78325 824 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 SNTB2Q13425 540 aaKnown RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 MEP1BQ16820 701 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 KLHL12Q53G59 568 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ZNF544Q6NX49 715 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 PLBD1Q6P4A8 553 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 VHLLQ6RSH7 139 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ARL9Q6T311 187 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ZNF771Q7L3S4 317 aaPredicted RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 CXXC5Q7LFL8 322 aaKnown RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 OR51L1Q8NGJ5 315 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 LILRB1Q8NHL6 650 aaPredicted RBP12.77□□□□□ -0.37
HPS1-205ENST00000414009 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 ZNF75AQ96N20 296 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 LIME1Q9H400 295 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 MED20Q9H944 212 aa12.77□□□□□ -0.37
HPS1-205ENST00000414009 DSCAMO60469 2012 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 SPG11Q96JI7 2443 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 ZAR1LA6NP61 321 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 E7EQL1 145 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 PRODHO43272 600 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 GLCEO94923 617 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 SCG5P05408 212 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 COX5BP10606 129 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 BMP4P12644 408 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 CALCRP30988 508 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 APOBEC3AP31941 199 aaPredicted RBP12.76□□□□□ -0.37
HPS1-205ENST00000414009 RAD52P43351 418 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 HTR5AP47898 357 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 CDC42P60953 191 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 TRIP10Q15642 601 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 SLX4IPQ5VYV7 408 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 KRT80Q6KB66 452 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 ZNF774Q6NX45 483 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 ZNF584Q8IVC4 421 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 GABARAPL3Q9BY60 117 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 WNT5BQ9H1J7 359 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 DCLRE1BQ9H816 532 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 CA10Q9NS85 328 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
HPS1-205ENST00000414009 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 TVP23AA6NH52 213 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 SNAP29O95721 258 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 TFP02787 698 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 CLUP10909 449 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 CCL2P13500 99 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 ZNF35P13682 527 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 NR4A1P22736 598 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 GSTT1P30711 240 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 TTKP33981 857 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 ENTPD1P49961 510 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 ELF3P78545 371 aaPredicted RBP12.75□□□□□ -0.37
HPS1-205ENST00000414009 RAB35Q15286 201 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 SLC35D3Q5M8T2 416 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 LCN1P1Q5VSP4 162 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 DCHS2Q6V1P9 2916 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 LINC00346Q8IVM7 164 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 MUC15Q8N387 334 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 CPEB3Q8NE35 698 aaKnown RBP12.75□□□□□ -0.37
HPS1-205ENST00000414009 PITX2Q99697 317 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 GRIP2Q9C0E4 1043 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 HDHD2Q9H0R4 259 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 HINT3Q9NQE9 182 aaKnown RBP12.75□□□□□ -0.37
HPS1-205ENST00000414009 C8orf4Q9NR00 106 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 IMPAD1Q9NX62 359 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 CMAHPQ9Y471 501 aa12.75□□□□□ -0.37
HPS1-205ENST00000414009 ANKRD17O75179 2603 aaKnown RBP12.74□□□□□ -0.37
HPS1-205ENST00000414009 RER1O15258 196 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 TLX2O43763 284 aaPredicted RBP12.74□□□□□ -0.37
HPS1-205ENST00000414009 SMPD2O60906 423 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 ATE1O95260 518 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 LCKP06239 509 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 SPARCP09486 303 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 SELENOVP59797 346 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 HGFACQ04756 655 aa12.74□□□□□ -0.37
HPS1-205ENST00000414009 DBPQ10586 325 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms