RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 FAM110CQ1W6H9 321 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GCSAMLQ5JQS6 135 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MRPL54Q6P161 138 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF813Q6ZN06 617 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HMGCLL1Q8TB92 370 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SYNPRQ8TBG9 265 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZMYND19Q96E35 227 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MRGPRX2Q96LB1 330 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SLC22A12Q96S37 553 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZFYVE21Q9BQ24 234 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SLC45A2Q9UMX9 530 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 EMC9Q9Y3B6 208 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FBLL1A6NHQ2 334 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HSPB6O14558 160 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNHIT1O43257 154 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PVRP15151 417 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 AOC1P19801 751 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ARRB2P32121 409 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NAAAQ02083 359 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TCF23Q7RTU1 214 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 RTN4RL1Q86UN2 441 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 BPIFB2Q8N4F0 458 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SLC5A8Q8N695 610 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NUBPLQ8TB37 319 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ASB10Q8WXI3 467 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PRR11Q96HE9 360 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FAM210BQ96KR6 192 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TXLNGYQ9BZA5 131 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ADARB2Q9NS39 739 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 BARHL2Q9NY43 387 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FKBP11Q9NYL4 201 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HRH3Q9Y5N1 445 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 COL15A1P39059 1388 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA31A5Q5VU36 1347 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SPATA31A3Q5VYP0 1347 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 RBFOX3A6NFN3 312 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GPR31O00270 319 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CNTN5O94779 1100 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LALBAP00709 142 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SOD3P08294 240 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ACAA1P09110 424 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ID4P47928 161 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ELLP55199 621 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SH3BP2P78314 561 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SRSF6Q13247 344 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 WDR88Q6ZMY6 472 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MOB3CQ70IA8 216 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LRRC56Q8IYG6 542 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 DYNLRB2Q8TF09 96 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ADAT3Q96EY9 351 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HMCESQ96FZ2 354 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MARCH4Q9P2E8 410 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MRPS28Q9Y2Q9 187 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ABCA8O94911 1581 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV8-7A0A075B6U6 113 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ST8SIA3O43173 380 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 XRCC2O43543 280 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CLDN11O75508 207 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 S1PR2O95136 353 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 DUS4LO95620 317 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 NRASP01111 189 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 HRASP01112 189 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 KRASP01116 189 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MGPP08493 103 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 MAPTP10636 758 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ADRA1BP35368 520 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ANKRD55Q3KP44 614 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CPZQ66K79 652 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 LYPD4Q6UWN0 246 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF600Q6ZNG1 722 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF788Q6ZQV5 615 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ILDR1Q86SU0 546 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FAM71F1Q96KD3 344 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 POM121L2Q96KW2 1035 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 C2orf88Q9BSF0 95 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ZNF665Q9H7R5 613 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 OSGIN1Q9UJX0 560 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TSPAN16Q9UKR8 245 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 CFAP20Q9Y6A4 193 aaKnown RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SHROOM2Q13796 1616 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TRAV38-1A0A0B4J264 116 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SLC15A5A6NIM6 579 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 AQP9O43315 295 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 GBAP04062 536 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 SMIM13P0DJ93 91 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PRDX2P32119 198 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PGGT1BP53609 377 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TMEM33P57088 247 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TNFRSF17Q02223 184 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PMS2P11Q13670 270 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 KCNC3Q14003 757 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PPM1JQ5JR12 505 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 PMS2CLQ68D20 193 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 TXNDC8Q6A555 127 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 FAM53AQ6NSI3 398 aaPredicted RBP4.23□□□□□ -1.73
PTPN13-202ENST00000411767 UNQ5815/PRO19632Q6UWF5 114 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 METTL7BQ6UX53 244 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ETFBKMTQ8IXQ9 262 aa4.23□□□□□ -1.73
PTPN13-202ENST00000411767 ACVR1CQ8NER5 493 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms