RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 A2MP01023 1474 aa3.92□□□□□ -1.78
LSM5-206ENST00000409987 AHDC1Q5TGY3 1603 aaPredicted RBP3.92□□□□□ -1.78
LSM5-206ENST00000409987 ARHGAP5Q13017 1502 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 IGHV1OR21-1A0A087WYE8 117 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 SMIM28A0A1B0GU29 152 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 A0A1B0GW55 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MGAT4DA6NG13 374 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 TOR1AO14656 332 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ITGB1BP1O14713 200 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MGRN1O60291 552 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PLXNC1O60486 1568 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MPDU1O75352 247 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 SC5DO75845 299 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 LSM8O95777 96 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L2P0CJ85 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L3P0CJ86 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L4P0CJ87 422 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L5P0CJ88 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L6P0CJ89 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L7P0CJ90 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 LAMP1P11279 417 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 TCN1P20061 433 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 PCK1P35558 622 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 KIR2DS2P43631 304 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 STXBP1P61764 594 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 ACTA2P62736 377 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ACTG2P63267 376 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ACTC1P68032 377 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ACTA1P68133 377 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MRPS15P82914 257 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 ECH1Q13011 328 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PIGHQ14442 188 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 DIP2AQ14689 1571 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 SLC10A1Q14973 349 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MARCH8Q5T0T0 291 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ZNF691Q5VV52 312 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 TMIGD1Q6UXZ0 262 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 MYPOPQ86VE0 399 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 NAXDQ8IW45 347 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PRR22Q8IZ63 422 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PUSL1Q8N0Z8 303 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 OR51F2Q8NH61 342 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ACOT11Q8WXI4 607 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 RPEQ96AT9 228 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 LRRC45Q96CN5 670 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ZNF514Q96K75 400 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 ALS2CR12Q96Q35 445 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 OR5B12Q96R08 314 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 SRXN1Q9BYN0 137 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 C1orf198Q9H425 327 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 NXF3Q9H4D5 531 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 TMEM38AQ9H6F2 299 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ARMC7Q9H6L4 198 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 IMPAD1Q9NX62 359 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 RBAKQ9NYW8 714 aaPredicted RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 DUX4Q9UBX2 424 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
LSM5-206ENST00000409987 PSMD13Q9UNM6 376 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PPIL1Q9Y3C6 166 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 HYOU1Q9Y4L1 999 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 PUS1Q9Y606 427 aaKnown RBP eCLIP3.91□□□□□ -1.78
LSM5-206ENST00000409987 ARHGAP23Q9P227 1491 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 FANCIQ9NVI1 1328 aa3.91□□□□□ -1.78
LSM5-206ENST00000409987 ITSN2Q9NZM3 1697 aa3.9□□□□□ -1.78
LSM5-206ENST00000409987 IGKV1D-8A0A087WSZ0 117 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 A0A087WWV3 80 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 H3BN98 237 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 RAD51BO15315 384 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 SNAI2O43623 268 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 IGHV1-2P23083 117 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 CCR8P51685 355 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 BLVRAP53004 296 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 UGT2B15P54855 530 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.79
LSM5-206ENST00000409987 SP4Q02446 784 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 RUNX3Q13761 415 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 DGCR6Q14129 220 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 GGTLC2Q14390 218 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 ATP6V1FQ16864 119 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 C5orf64Q2M2E5 130 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
LSM5-206ENST00000409987 TIGD3Q6B0B8 471 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 APOBEC3HQ6NTF7 200 aaKnown RBP3.9□□□□□ -1.79
LSM5-206ENST00000409987 Q6ZN92 141 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 TPGS1Q6ZTW0 290 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 ZNF546Q86UE3 836 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 RDH10Q8IZV5 341 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 KIF2BQ8N4N8 673 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 OR2AP1Q8NGE2 309 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 CENPNQ96H22 339 aaPredicted RBP3.9□□□□□ -1.79
LSM5-206ENST00000409987 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 CTRCQ99895 268 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 RARRES2Q99969 163 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 UTP23Q9BRU9 249 aaKnown RBP3.9□□□□□ -1.79
LSM5-206ENST00000409987 ELOVL4Q9GZR5 314 aa3.9□□□□□ -1.79
LSM5-206ENST00000409987 CTPS2Q9NRF8 586 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms