RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CLCF1Q9UBD9 225 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 ZNF175Q9Y473 711 aa10.98□□□□□ -0.65
CHMP3-204ENST00000409727 CACNA1GO43497 2377 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 TRDV1A0A1B0GX56 115 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 A0A1W2PPK0 400 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ZFPL1O95159 310 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 PNPP00491 289 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 PAX7P23759 505 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 AGTR1P30556 359 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 PEX19P40855 299 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 TGM4P49221 684 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ROM1Q03395 351 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ALKBH1Q13686 389 aaKnown RBP10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ENDOGQ14249 297 aaKnown RBP10.97□□□□□ -0.65
CHMP3-204ENST00000409727 INAQ16352 499 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 KCNMB1Q16558 191 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 FAM27D1Q5T7N8 215 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 GDPGP1Q6ZNW5 385 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ALDH16A1Q8IZ83 802 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 PRSS35Q8N3Z0 413 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 Q8NA96 180 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 OR10S1Q8NGN2 331 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 ABHD4Q8TB40 342 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 PPP1R14AQ96A00 147 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 KCTD7Q96MP8 289 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 GPR137Q96N19 417 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 SNTG1Q9NSN8 517 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 TMEM38BQ9NVV0 291 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 UPB1Q9UBR1 384 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 N6AMT1Q9Y5N5 214 aa10.97□□□□□ -0.65
CHMP3-204ENST00000409727 CDRT1O95170 752 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 TPOP07202 933 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 PATE4P0C8F1 98 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 UGT2B10P36537 528 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 MAGEB1P43366 347 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 FAPQ12884 760 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 TAF13Q15543 124 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 WDR38Q5JTN6 314 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 CD200R1LQ6Q8B3 271 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 CEACAM19Q7Z692 300 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 OR2G2Q8NGZ5 317 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 OR5AK2Q8NH90 309 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 CPT1CQ8TCG5 803 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 SNRNP27Q8WVK2 155 aaKnown RBP10.96□□□□□ -0.65
CHMP3-204ENST00000409727 RNF133Q8WVZ7 376 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 FOXB1Q99853 325 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 CXorf56Q9H5V9 222 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 PRSS50Q9UI38 385 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 SLC22A13Q9Y226 551 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 GSTK1Q9Y2Q3 226 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 EMC9Q9Y3B6 208 aa10.96□□□□□ -0.65
CHMP3-204ENST00000409727 ATMQ13315 3056 aa10.96□□□□□ -0.66
CHMP3-204ENST00000409727 A0A096LPE4 126 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 A0A1W2PPZ6 126 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 OR14I1A6ND48 311 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF587BE7ETH6 402 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 CLEC2LP0C7M8 214 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ABOP16442 354 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 CALRP27797 417 aaKnown RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 HSD11B1P28845 292 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 SDC2P34741 201 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 RPS19P39019 145 aaKnown RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 OPRL1P41146 370 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 FOXG1P55316 489 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 LSM6P62312 80 aaKnown RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 MRPS34P82930 218 aaKnown RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 LSAMPQ13449 338 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 DGUOKQ16854 277 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ACSF3Q4G176 576 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ACSM3Q53FZ2 586 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 PRR30Q53SZ7 412 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 RIPPLY2Q5TAB7 128 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 KLHL24Q6TFL4 600 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 C3P1Q6ZMU1 363 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 FOXL2NBQ6ZUU3 175 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ADGRE4PQ86SQ3 457 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF676Q8N7Q3 588 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 CNEP1R1Q8N9A8 125 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 C9orf106Q8NAJ2 232 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 FBXO17Q96EF6 278 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 OR14A2Q96R54 314 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 PPIL3Q9H2H8 161 aaKnown RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 SLC5A6Q9Y289 635 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 PMF1-BGLAPU3KQ54 211 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 SVILO95425 2214 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF878C9JN71 531 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 FGF9P31371 208 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 KIR3DL2P43630 455 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 RPS11P62280 158 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 GALK2Q01415 458 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF813Q6ZN06 617 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 RGP1Q92546 391 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 GMPPAQ96IJ6 420 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-204ENST00000409727 C4orf45Q96LM5 186 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 KCNN2Q9H2S1 579 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 SIAEQ9HAT2 523 aa10.95□□□□□ -0.66
CHMP3-204ENST00000409727 ZNF281Q9Y2X9 895 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms