RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 CD3GP09693 182 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 ZNF688P0C7X2 276 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 TGFBR1P36897 503 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 SSR4P51571 173 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 TPMTP51580 245 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 UBE2HP62256 183 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 IL24Q13007 206 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 IL15RAQ13261 267 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 RCAN2Q14206 197 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 LRRC23Q53EV4 343 aaPredicted RBP1.85□□□□□ -2.11
PMS1-203ENST00000409593 TMEM256Q8N2U0 113 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 TMEM105Q8N8V8 129 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 ZFP41Q8N8Y5 198 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 BHLHE23Q8NDY6 225 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 PLPPR1Q8TBJ4 325 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 C17orf50Q8WW18 174 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 PTX4Q96A99 478 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 TSGA13Q96PP4 275 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 ETNK2Q9NVF9 386 aa1.85□□□□□ -2.11
PMS1-203ENST00000409593 DHCR7Q9UBM7 475 aaKnown RBP1.85□□□□□ -2.11
PMS1-203ENST00000409593 CENPVL3A0A0U1RRI6 287 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 VGLL3A8MV65 326 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 GPR89AB7ZAQ6 455 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 L7N2F9 121 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 GPR89BP0CG08 455 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 COL8A2P25067 703 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 CCNG1P51959 295 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 FLI1Q01543 452 aaPredicted RBP1.84□□□□□ -2.11
PMS1-203ENST00000409593 SLC25A11Q02978 314 aaKnown RBP1.84□□□□□ -2.11
PMS1-203ENST00000409593 BAMBIQ13145 260 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 SPINT4Q6UDR6 99 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 ZNF502Q8TBZ5 544 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 SLC7A13Q8TCU3 470 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 GALNT14Q96FL9 552 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 HSD17B10Q99714 261 aaKnown RBP1.84□□□□□ -2.11
PMS1-203ENST00000409593 ZNF391Q9UJN7 358 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 ATP6V0A2Q9Y487 856 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 ZNF407Q9C0G0 2248 aa1.84□□□□□ -2.11
PMS1-203ENST00000409593 MAPK8IP3Q9UPT6 1336 aa1.84□□□□□ -2.12
PMS1-203ENST00000409593 TRAV19A0A0A6YYK7 116 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 GLYATL1P3A0A0U1RQE8 302 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 PTMAP06454 111 aaKnown RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 ZNF250P15622 560 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ME2P23368 584 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 HCAR3P49019 387 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 RND2P52198 227 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 CDKN2DP55273 166 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 TAS2R31P59538 309 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 CDK5Q00535 292 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 GPM6BQ13491 265 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 MPV17L2Q567V2 206 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 CTSL3PQ5NE16 218 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 EGFL6Q8IUX8 553 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ST20-AS1Q8NBB2 130 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 LRRC29Q8WV35 223 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 UBE2Q2Q8WVN8 375 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 FGF23Q9GZV9 251 aaPredicted RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 EDA2RQ9HAV5 297 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 SUN2Q9UH99 717 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 CAMTA1Q9Y6Y1 1673 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 TRAV6A0A075B6T7 132 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ZNF98A6NK75 572 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 MRPS12O15235 138 aaKnown RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 SPAG6O75602 509 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 GDI2P50395 445 aaKnown RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 P2RX1P51575 399 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 GBX2P52951 348 aaPredicted RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 CRADDP78560 199 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 AVPI1Q5T686 147 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 KDELC1Q6UW63 502 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 OR8J1Q8NGP2 316 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 OR5B3Q8NH48 314 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 LHX5Q9H2C1 402 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ZNF230Q9UIE0 474 aaPredicted RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 NUP50Q9UKX7 468 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ISY1Q9ULR0 285 aaKnown RBP1.83□□□□□ -2.12
PMS1-203ENST00000409593 CBY1Q9Y3M2 126 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 KCNE3Q9Y6H6 103 aa1.83□□□□□ -2.12
PMS1-203ENST00000409593 ADGRL1O94910 1474 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 NID2Q14112 1375 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 C16orf90A8MZG2 172 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 REM1O75628 298 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 CLPXO76031 633 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 RAB3AP20336 220 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 CCNHP51946 323 aaPredicted RBP1.82□□□□□ -2.12
PMS1-203ENST00000409593 VSX2P58304 361 aaPredicted RBP1.82□□□□□ -2.12
PMS1-203ENST00000409593 SRSF5Q13243 272 aaKnown RBP1.82□□□□□ -2.12
PMS1-203ENST00000409593 TTLQ8NG68 377 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 OR5M1Q8NGP8 315 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 OR5B12Q96R08 314 aa1.82□□□□□ -2.12
PMS1-203ENST00000409593 FRMD8P1Q9BZ68 369 aaPredicted RBP1.82□□□□□ -2.12
PMS1-203ENST00000409593 IGHV3OR16-8A0A075B7F1 116 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 ARHGEF35A5YM69 484 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 FAM47DPA6NHR8 397 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 DNASE2O00115 360 aaPredicted RBP1.81□□□□□ -2.12
PMS1-203ENST00000409593 SLC22A5O76082 557 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 MCF2P10911 925 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 TNFSF9P41273 254 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 CRYBB2P43320 205 aa1.81□□□□□ -2.12
PMS1-203ENST00000409593 CSNK1EP49674 416 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms