RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 LSM6P62312 80 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 CCL8P80075 99 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 GLO1Q04760 184 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 RFX4Q33E94 735 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 FAM120AOSQ5T036 256 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 PTCHD4Q6ZW05 846 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 FITM2Q8N6M3 262 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 LINC01356Q8N9X3 169 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 ABHD4Q8TB40 342 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 OR2J1Q9GZK6 312 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 RACGAP1Q9H0H5 632 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 RERGLQ9H628 205 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 TMCC3Q9ULS5 477 aa16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 COA3Q9Y2R0 106 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-209ENST00000409543 IMPA2O14732 288 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 SGCEO43556 437 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 OR10H3O60404 316 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 RRM2P31350 389 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 SLC6A6P31641 620 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 LIPAP38571 399 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 CDKN2AP42771 156 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 ZNF81P51508 661 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 MMP15P51511 669 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 CDH15P55291 814 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 AQP6Q13520 282 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 KCNMB1Q16558 191 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 ZDHHC21Q8IVQ6 265 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 IPCEF1Q8WWN9 437 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 GTF3AQ92664 365 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 ERMAPQ96PL5 475 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 NUAK2Q9H093 628 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 ACTR3BQ9P1U1 418 aa16.72■□□□□ 0.27
TSPAN4-209ENST00000409543 PLSCR5A0PG75 271 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 B2RBV5 119 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 ARPC3O15145 178 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 PPIHO43447 177 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 DOK2O60496 412 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 MPZL1O95297 269 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 PPP1R3DO95685 299 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 HNF1AP20823 631 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TUBG1P23258 451 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 CRABP1P29762 137 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 CRYBB2P43320 205 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 HTR5AP47898 357 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 GSSP48637 474 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TEKQ02763 1124 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TMEM255AQ5JRV8 349 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 C1orf94Q6P1W5 598 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 VASH1Q7L8A9 365 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 ARHGAP24Q8N264 748 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 CLDND2Q8NHS1 167 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 FANK1Q8TC84 345 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 NSL1Q96IY1 281 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 OR52D1Q9H346 318 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TUBG2Q9NRH3 451 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 CYSLTR2Q9NS75 346 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 DECR2Q9NUI1 292 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TBCCD1Q9NVR7 557 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 CGGBP1Q9UFW8 167 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 DNHD1Q96M86 4753 aa16.71■□□□□ 0.27
TSPAN4-209ENST00000409543 TPD52L2O43399 206 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 CDC14BO60729 498 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 KRT36O76013 467 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 ABHD16AO95870 558 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 THBS2P35442 1172 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 HMGA2P52926 109 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 CCNIQ14094 377 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 TSTQ16762 297 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 FAM209AQ5JX71 171 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 DNM1P34Q6PK57 102 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 CXXC5Q7LFL8 322 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 NPEPL1Q8NDH3 523 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 GNPDA2Q8TDQ7 276 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 PLEK2Q9NYT0 353 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 ASH2LQ9UBL3 628 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 KLHL21Q9UJP4 597 aa16.7■□□□□ 0.26
TSPAN4-209ENST00000409543 IGHV1-69-2A0A0G2JMI3 117 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 B4DSR2 109 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 SPRY3O43610 288 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 IDH3BO43837 385 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 FAM107AO95990 144 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 IGHV1-46P01743 117 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 TFP02787 698 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 ADH4P08319 380 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 SRD5A1P18405 259 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 CR1LQ2VPA4 569 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 OTPQ5XKR4 325 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 PGM2L1Q6PCE3 622 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 CYP2R1Q6VVX0 501 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 USP51Q70EK9 711 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 SAMD8Q96LT4 415 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 TSSK2Q96PF2 358 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 IFT27Q9BW83 186 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 SAP30LQ9HAJ7 183 aa16.69■□□□□ 0.26
TSPAN4-209ENST00000409543 IGLV1-36A0A0B4J1U3 117 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 OR6C6A6NF89 314 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 ZSCAN5BA6NJL1 495 aa16.68■□□□□ 0.26
TSPAN4-209ENST00000409543 DCTN6O00399 190 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms