RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 FKBP14Q9NWM8 211 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ASH2LQ9UBL3 628 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 PSORS1C1Q9UIG5 152 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 GDF2Q9UK05 429 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 LRCH1Q9Y2L9 728 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 POLR1DQ9Y2S0 133 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF503-AS2A6NEH8 195 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF670-ZNF695F2Z2N8 137 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 PTHP01270 115 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 HLA-HP01893 362 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 LYNP07948 512 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 SPARCP09486 303 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 PATE4P0C8F1 98 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 CRHBPP24387 322 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 GRNP28799 593 aaKnown RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 RPS27P42677 84 aaKnown RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 HCCSP53701 268 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 PSG4Q00888 419 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 PIGFQ07326 219 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 EIF2B1Q14232 305 aaKnown RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 PPA1Q15181 289 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 TAB1Q15750 504 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 GSG1Q2KHT4 349 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 C3orf36Q3SXR2 165 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 CCDC92Q53HC0 331 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 C22orf34Q6ZV56 151 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 DCXRQ7Z4W1 244 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 LINC00346Q8IVM7 164 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ALDH16A1Q8IZ83 802 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF786Q8N393 782 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ACBD7Q8N6N7 88 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 OR52N5Q8NH56 324 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ASB17Q8WXJ9 295 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 MYDGFQ969H8 173 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 TMEM80Q96HE8 168 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 MYCBPQ99417 103 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 ABHD6Q9BV23 337 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 JAM3Q9BX67 310 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 OR2H1Q9GZK4 316 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 DUSP21Q9H596 190 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 INPP5EQ9NRR6 644 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 CRNNQ9UBG3 495 aaPredicted RBP10.74□□□□□ -0.69
LINC00339-201ENST00000404210 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 FBXL3Q9UKT7 428 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 BLOC1S6Q9UL45 172 aa10.74□□□□□ -0.69
LINC00339-201ENST00000404210 CACNA1CQ13936 2221 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 A0A1W2PR80 420 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 PTGES3LE9PB15 166 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 RER1O15258 196 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 SGCEO43556 437 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 RAB36O95755 333 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 IGKV3-15P01624 115 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 IGHA1P01876 353 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 SERPINA5P05154 406 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 RNF224P0DH78 156 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 COX5BP10606 129 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 PSKH1P11801 424 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 ACTC1P68032 377 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 ACTA1P68133 377 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 TUBA1BP68363 451 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 TUBA4AP68366 448 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 SLC35A2P78381 396 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 PLP2Q04941 152 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 ST3GAL4Q11206 333 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 ELFN2Q5R3F8 820 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 KCTD18Q6PI47 426 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-201ENST00000404210 CORO6Q6QEF8 472 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 TUBA1AQ71U36 451 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 MDP1Q86V88 176 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 STX19Q8N4C7 294 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 LINC01560Q8TB33 94 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 ST7LQ8TDW4 575 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 SMAP2Q8WU79 429 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-201ENST00000404210 THEM6Q8WUY1 208 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 MAP6Q96JE9 813 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 DACH2Q96NX9 599 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 COPS4Q9BT78 406 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 WNT5BQ9H1J7 359 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 NGBQ9NPG2 151 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 NPDC1Q9NQX5 325 aaPredicted RBP10.73□□□□□ -0.69
LINC00339-201ENST00000404210 PLEK2Q9NYT0 353 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 DIMT1Q9UNQ2 313 aaKnown RBP10.73□□□□□ -0.69
LINC00339-201ENST00000404210 COPS3Q9UNS2 423 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 MYRFQ9Y2G1 1151 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 BOLA1Q9Y3E2 137 aa10.73□□□□□ -0.69
LINC00339-201ENST00000404210 IQCMA0A1B0GVH7 501 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 A0A1W2PQL4 384 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 DAPL1A0PJW8 107 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 TUBAL3A6NHL2 446 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 SYNGR3O43761 229 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 MRPS14O60783 128 aaKnown RBP10.72□□□□□ -0.69
LINC00339-201ENST00000404210 APOL3O95236 402 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 IGLV1-44P01699 117 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 CDK1P06493 297 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 THBDP07204 575 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 EGR3Q06889 387 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 ECH1Q13011 328 aa10.72□□□□□ -0.69
LINC00339-201ENST00000404210 RAB39AQ14964 217 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms