RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 PPP1CBP62140 327 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 KCNMB1Q16558 191 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 RFX4Q33E94 735 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 ALKBH6Q3KRA9 238 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 C1orf94Q6P1W5 598 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 PGM2L1Q6PCE3 622 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 DNM1P34Q6PK57 102 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 ARL9Q6T311 187 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 RFPL4BQ6ZWI9 263 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 CCDC197Q8NCU1 140 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 ABHD4Q8TB40 342 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 SLC25A40Q8TBP6 338 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 IPCEF1Q8WWN9 437 aaPredicted RBP12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 POP5Q969H6 163 aaKnown RBP12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 C1orf159Q96HA4 380 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 ERMAPQ96PL5 475 aaPredicted RBP12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 NUAK2Q9H093 628 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 CGGBP1Q9UFW8 167 aaPredicted RBP12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 ATPIF1Q9UII2 106 aa12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 COA3Q9Y2R0 106 aaPredicted RBP12.7□□□□□ -0.38
SMIM11A-203ENST00000399299 SGCEO43556 437 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 DOK2O60496 412 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 PPP1R3DO95685 299 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 IFNA2P01563 188 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 ATP6V1B2P21281 511 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TUBG1P23258 451 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 IGFBP5P24593 272 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 COL8A2P25067 703 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 CRABP1P29762 137 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 CDKN2AP42771 156 aaKnown RBP12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 MAGEB1P43366 347 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 GPR6P46095 362 aaPredicted RBP12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 ARHGDIAP52565 204 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TSPAN31Q12999 210 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TRIP10Q15642 601 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 FAM209AQ5JX71 171 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 SPATA46Q5T0L3 261 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 LCN8Q6JVE9 175 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 CYP2R1Q6VVX0 501 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 LINC00471Q8N535 108 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 KLF14Q8TD94 323 aaPredicted RBP12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 GNPDA2Q8TDQ7 276 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 YIPF5Q969M3 257 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 C4orf45Q96LM5 186 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 SOX7Q9BT81 388 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 BEX2Q9BXY8 128 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 OR2J1Q9GZK6 312 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 SHARPINQ9H0F6 387 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 MAGIXQ9H6Y5 334 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 ZNF275Q9NSD4 429 aaPredicted RBP12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TBCCD1Q9NVR7 557 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 LYVE1Q9Y5Y7 322 aa12.69□□□□□ -0.38
SMIM11A-203ENST00000399299 TCRBV5S2A0A599 114 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 PLSCR5A0PG75 271 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 IDH3BO43837 385 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 ABHD16AO95870 558 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 NGFP01138 241 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 ADH4P08319 380 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 IL2RGP31785 369 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 LIPAP38571 399 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 MPV17P39210 176 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 HTR5AP47898 357 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 MMP15P51511 669 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 CCL8P80075 99 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 TEKQ02763 1124 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 TRIM25Q14258 630 aaKnown RBP12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 TMEM255AQ5JRV8 349 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 RPL13AP3Q6NVV1 102 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 PGBD2Q6P3X8 592 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 ZNF620Q6ZNG0 422 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 LINC01356Q8N9X3 169 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 TRIM15Q9C019 465 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 RERGLQ9H628 205 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 ASH2LQ9UBL3 628 aa12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 PRPF19Q9UMS4 504 aaKnown RBP12.68□□□□□ -0.38
SMIM11A-203ENST00000399299 TANC2Q9HCD6 1990 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 STAB1Q9NY15 2570 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 IGLV1-36A0A0B4J1U3 117 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 OR6C6A6NF89 314 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 J3QW42 95 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 DCTN6O00399 190 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 RENP00797 406 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 TGFAP01135 160 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 TFP02787 698 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 GAAP10253 952 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 GSTM3P21266 225 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 CRYBB2P43320 205 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 ZNF81P51508 661 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 CDH15P55291 814 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 GLO1Q04760 184 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 ZMAT1Q5H9K5 638 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 LEG1Q6P5S2 330 aa12.67□□□□□ -0.38
SMIM11A-203ENST00000399299 JAZF1Q86VZ6 243 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms