RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 DNAJB6O75190 326 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 MC3RP41968 323 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 SMAD3P84022 425 aaKnown RBP13.6□□□□□ -0.23
CYLD-202ENST00000398568 OR4C11Q6IEV9 310 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 HSD11B1LQ7Z5J1 315 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TRAM1L1Q8N609 369 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 C12orf76Q8N812 135 aaPredicted RBP13.6□□□□□ -0.23
CYLD-202ENST00000398568 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 LMF1Q96S06 567 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 NMES1Q9C002 83 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 RHBGQ9H310 441 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TAC3Q9UHF0 121 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 PLAGL1Q9UM63 463 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TRAV8-7A0A075B6U6 113 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TRBV6-7A0A0A0MS04 114 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 LOC100289279A0A1B0GTE1 492 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 AK1P00568 194 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 FABP4P15090 132 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TRA2BP62995 288 aaKnown RBP13.6□□□□□ -0.23
CYLD-202ENST00000398568 GUK1Q16774 197 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 ZNF385CQ66K41 422 aaPredicted RBP13.6□□□□□ -0.23
CYLD-202ENST00000398568 AMER3Q8N944 861 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 TMEM106AQ96A25 262 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 Q96M85 177 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 PPIL1Q9Y3C6 166 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 MMP24Q9Y5R2 645 aa13.6□□□□□ -0.23
CYLD-202ENST00000398568 KIF26AQ9ULI4 1882 aaPredicted RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 OR5H15A6NDH6 313 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 OR5H1A6NKK0 313 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 FAM157AC9JC47 383 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 OR8G3PP0DMU2 310 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 DEFB123Q8N688 67 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 LCN9Q8WX39 176 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ADAM29Q9UKF5 820 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 SMCO3A2RU48 225 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 MSGN1A6NI15 193 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ELOA3DA6NLF2 546 aaPredicted RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 ERCC1P07992 297 aaPredicted RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 TACR3P29371 465 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 RPL4P36578 427 aaKnown RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 SLC9A5Q14940 896 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ELOA3BQ3SY89 546 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 RPL7L1Q6DKI1 246 aaKnown RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 TRAPPC5Q8IUR0 188 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ELOA3Q8NG57 546 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 CCDC74AQ96AQ1 378 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 KCNK15Q9H427 330 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 SMOC1Q9H4F8 434 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 CRLF2Q9HC73 371 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ICAM5Q9UMF0 924 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 IER3IP1Q9Y5U9 82 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 TBX6O95947 436 aaPredicted RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 IL2RAP01589 272 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 PPM1AP35813 382 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 KHDC3LQ587J8 217 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 BIVMQ86UB2 503 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 OR2L5Q8NG80 312 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 MR1Q95460 341 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 ADAD1Q96M93 576 aaKnown RBP13.59□□□□□ -0.23
CYLD-202ENST00000398568 IKZF2Q9UKS7 526 aa13.59□□□□□ -0.23
CYLD-202ENST00000398568 TAAR5O14804 337 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 SOD2P04179 222 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 ZNF735P0CB33 412 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 ADRB3P13945 408 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 ZNF136P52737 540 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 GGTLC2Q14390 218 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 TOMM34Q15785 309 aaPredicted RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 ODF4Q2M2E3 257 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 PRSS54Q6PEW0 395 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 ZDHHC22Q8N966 263 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 PNLDC1Q8NA58 520 aaKnown RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 TSEN15Q8WW01 171 aaKnown RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 CRABP1P29762 137 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 TNFRSF9Q07011 255 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 ZNF574Q6ZN55 896 aaPredicted RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 COMMD1Q8N668 190 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 GRHL3Q8TE85 626 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 SLC17A5Q9NRA2 495 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 VSX1Q9NZR4 365 aaPredicted RBP13.58□□□□□ -0.24
CYLD-202ENST00000398568 TMED7Q9Y3B3 224 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 PUS1Q9Y606 427 aaKnown RBP eCLIP13.58□□□□□ -0.24
CYLD-202ENST00000398568 COL4A6Q14031 1691 aa13.58□□□□□ -0.24
CYLD-202ENST00000398568 TMEM235A6NFC5 223 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 GMFGO60234 142 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 STK17BO94768 372 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 IFNA6P05013 189 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 CKMP06732 381 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 ZNF616Q08AN1 781 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 SPNS3Q6ZMD2 512 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 GPR148Q8TDV2 347 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 NOL4LQ96MY1 436 aaPredicted RBP13.57□□□□□ -0.24
CYLD-202ENST00000398568 ATG101Q9BSB4 218 aa13.57□□□□□ -0.24
CYLD-202ENST00000398568 KLF16Q9BXK1 252 aaPredicted RBP13.57□□□□□ -0.24
CYLD-202ENST00000398568 UNKLQ9H9P5 680 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms