RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FGGYQ96C11 551 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 DHRS1Q96LJ7 313 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 NOX4Q9NPH5 578 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 B3GAT1Q9P2W7 334 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 R4GMQ9 66 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 HOXB9P17482 250 aaPredicted RBP7.4□□□□□ -1.22
PTPRD-204ENST00000397606 CDAP32320 146 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 RAD52P43351 418 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 FMODQ06828 376 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 MTFR2Q6P444 385 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 KIF18BQ86Y91 864 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 PHC2Q8IXK0 858 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 CLEC4MQ9H2X3 399 aaPredicted RBP7.4□□□□□ -1.22
PTPRD-204ENST00000397606 RAB9BQ9NP90 201 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 REV1Q9UBZ9 1251 aa7.4□□□□□ -1.22
PTPRD-204ENST00000397606 LOC107986453A0A1B0GWG9 222 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 MASP2O00187 686 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 WBP4O75554 376 aaKnown RBP7.4□□□□□ -1.23
PTPRD-204ENST00000397606 GTF2F2P13984 249 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 PRSS3P35030 304 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 LIPAP38571 399 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 BCAP31P51572 246 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 P2RY14Q15391 338 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 GSG1Q2KHT4 349 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 WFDC8Q8IUA0 241 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 SLC22A24Q8N4F4 322 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 BMPERQ8N8U9 685 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 CSNK2A3Q8NEV1 391 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 OR5T2Q8NGG2 359 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 RPL3LQ92901 407 aaKnown RBP7.4□□□□□ -1.23
PTPRD-204ENST00000397606 TXNDC15Q96J42 360 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 AMY2BP19961 511 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 ALDH3B2P48448 385 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 RAB1AP62820 205 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 DEGS2Q6QHC5 323 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 APOOLQ6UXV4 268 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 KANSL1Q7Z3B3 1105 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 GPR155Q7Z3F1 870 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 ARMC10Q8N2F6 343 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 PRSS33Q8NF86 280 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 RAB40AQ8WXH6 277 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 ASB10Q8WXI3 467 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 OR8B4Q96RC9 309 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 SIGLEC11Q96RL6 698 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 PRSS27Q9BQR3 290 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 PLEKHJ1Q9NW61 149 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 SPATA2Q9UM82 520 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 PIGLQ9Y2B2 252 aa7.4□□□□□ -1.23
PTPRD-204ENST00000397606 BHLHE40O14503 412 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 EFSO43281 561 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 NME2P1O60361 137 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 TP53P04637 393 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 DBHP09172 617 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 TDGF1P13385 188 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 NME2P22392 152 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 OPRM1P35372 400 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 MRPS10P82664 201 aaKnown RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 GLRX5Q86SX6 157 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 IL17RDQ8NFM7 739 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 RND1Q92730 232 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SMIM19Q96E16 107 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 MED28Q9H204 178 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 TP63Q9H3D4 680 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 C14orf166Q9Y224 244 aaKnown RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 A0A0J9YW62 118 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 GABARAPO95166 117 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 HTR2CP28335 458 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CDK5R1Q15078 307 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 RAB35Q15286 201 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SPIN3Q5JUX0 258 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 AADACL4Q5VUY2 407 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 RTL6Q6ICC9 239 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF611Q8N823 705 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CA5BP1Q8WTZ4 195 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 HSD17B8Q92506 261 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SNX18Q96RF0 628 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 A0A1B0GTH9 108 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 M0R1B8 84 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 WRBO00258 174 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CTLA4P16410 223 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CPEP16870 476 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SHC1P29353 583 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF93P35789 620 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 C4orf46Q504U0 113 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 CD163Q86VB7 1156 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 TUSC5Q8IXB3 177 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 GDPD1Q8N9F7 314 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ADPRHL1Q8NDY3 354 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 OR1F12Q8NHA8 337 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 OR51E1Q8TCB6 317 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 KCNJ15Q99712 375 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 OPA3Q9H6K4 179 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SYNPO2LQ9H987 977 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 C14orf119Q9NWQ9 140 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 SLCO1C1Q9NYB5 712 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ING1Q9UK53 422 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF175Q9Y473 711 aa7.39□□□□□ -1.23
PTPRD-204ENST00000397606 COL4A4P53420 1690 aaPredicted RBP7.39□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF780AO75290 641 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms