RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 GNPDA2Q8TDQ7 276 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 ZNF75AQ96N20 296 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 GPA33Q99795 319 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 ZNF224Q9NZL3 707 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 ZNF346Q9UL40 294 aaKnown RBP12.61□□□□□ -0.39
SEC13-208ENST00000397109 CEPT1Q9Y6K0 416 aa12.61□□□□□ -0.39
SEC13-208ENST00000397109 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 PTHP01270 115 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 SERPINA5P05154 406 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 OR4A8P0C604 315 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 NPR2P20594 1047 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 GIPRP48546 466 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 NUDT6P53370 316 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 DSCR9P59020 149 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 EFNB3Q15768 340 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 ADIPOQQ15848 244 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 MST1LQ2TV78 715 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 SLC36A2Q495M3 483 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 THEM4Q5T1C6 240 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 VHLLQ6RSH7 139 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 SLC16A14Q7RTX9 510 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 BPIFB6Q8NFQ5 453 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 OR13C2Q8NGS9 318 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 Q96MT0 163 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 KCNK17Q96T54 332 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 TSC22D3Q99576 134 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 KCNN2Q9H2S1 579 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 RNF121Q9H920 327 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 NOX3Q9HBY0 568 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 IMPAD1Q9NX62 359 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 REV1Q9UBZ9 1251 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 RSL24D1Q9UHA3 163 aaKnown RBP12.6□□□□□ -0.39
SEC13-208ENST00000397109 SIGLEC7Q9Y286 467 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 TLN2Q9Y4G6 2542 aa12.6□□□□□ -0.39
SEC13-208ENST00000397109 SMAD7O15105 426 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 SSX4O60224 188 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PTP4A3O75365 173 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 GABRB1P18505 474 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 NR4A1P22736 598 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 EPHA2P29317 976 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 RPL4P36578 427 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 GUCA1AP43080 201 aaPredicted RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 MRPS34P82930 218 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 SLC25A30Q5SVS4 291 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SLX4IPQ5VYV7 408 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PRSS48Q7RTY5 328 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 MEX3DQ86XN8 651 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 CLDN22Q8N7P3 220 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 ARIH2OSQ8N7S6 290 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 MYDGFQ969H8 173 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 NMD3Q96D46 503 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SH3GL3Q99963 347 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 RHNO1Q9BSD3 238 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 C1orf198Q9H425 327 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SIAEQ9HAT2 523 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PTTG2Q9NZH5 202 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 CMAHPQ9Y471 501 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 RTTNQ86VV8 2226 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 ZFHX3Q15911 3703 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 AHCYL1O43865 530 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 HEXAP06865 529 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 CD14P08571 375 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PATE4P0C8F1 98 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 ZNF35P13682 527 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 THBS4P35443 961 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 EFNA4P52798 201 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 FXYD6P3P58550 94 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 GALK2Q01415 458 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PLP2Q04941 152 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SNTB2Q13425 540 aaKnown RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 RAB39AQ14964 217 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 CLEC2AQ6UVW9 174 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 RASSF6Q6ZTQ3 369 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 ZNF519Q8TB69 540 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 CNIH3Q8TBE1 160 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 FAM81AQ8TBF8 368 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 FCGR1BQ92637 280 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 GPX7Q96SL4 187 aaPredicted RBP12.59□□□□□ -0.39
SEC13-208ENST00000397109 DOK1Q99704 481 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 SMR3AQ99954 134 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 BCL7BQ9BQE9 202 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 REG4Q9BYZ8 158 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PRRG3Q9BZD7 231 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 PLK3Q9H4B4 646 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 GRHPRQ9UBQ7 328 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 FKBP7Q9Y680 259 aa12.59□□□□□ -0.39
SEC13-208ENST00000397109 H3BSA7 217 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 XKRYO14609 159 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 RGS10O43665 173 aa12.58□□□□□ -0.4
SEC13-208ENST00000397109 NDUFB2O95178 105 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms