RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 MED20Q9H944 212 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
SEC13-205ENST00000397101 ASB6Q9NWX5 421 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 DNAJC27Q9NZQ0 273 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 ING1Q9UK53 422 aaPredicted RBP11.88□□□□□ -0.51
SEC13-205ENST00000397101 RCE1Q9Y256 329 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 LRRC42Q9Y546 428 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 HSPE1-MOB4S4R3N1 261 aa11.88□□□□□ -0.51
SEC13-205ENST00000397101 LOC100289279A0A1B0GTE1 492 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 PRSS37A4D1T9 235 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SNTNA6NMZ2 147 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SPRY1O43609 319 aaPredicted RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 TCF21O43680 179 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SLC16A7O60669 478 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 IGHV1-2P23083 117 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 CD40P25942 277 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 FABP6P51161 128 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 LGALS3BPQ08380 585 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 MAD2L1BPQ15013 274 aaPredicted RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 C1QTNF12Q5T7M4 302 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 MEDAGQ5VYS4 303 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SLC22A25Q6T423 547 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 USP51Q70EK9 711 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 PROKR2Q8NFJ6 384 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 CNIH3Q8TBE1 160 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 FNDC8Q8TC99 324 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 NSMAFQ92636 917 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 MSI2Q96DH6 328 aaKnown RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SYT4Q9H2B2 425 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 HINT3Q9NQE9 182 aaKnown RBP11.87□□□□□ -0.51
SEC13-205ENST00000397101 PRSS50Q9UI38 385 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 POU2F3Q9UKI9 436 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 PMF1-BGLAPU3KQ54 211 aa11.87□□□□□ -0.51
SEC13-205ENST00000397101 SLC22A23A1A5C7 686 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 OR6C68A6NDL8 312 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 E9PQ18 207 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 KHDRBS3O75525 346 aaKnown RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 IGHV3-9P01782 118 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 HLA-DQA2P01906 255 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 QDPRP09417 244 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 PGA4P0DJD7 388 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 PGA3P0DJD8 388 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 CRABP1P29762 137 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 FMO3P31513 532 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 GUCA1AP43080 201 aaPredicted RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 NR4A2P43354 598 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 PDLIM4P50479 330 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 ISL1P61371 349 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 SNRPGP62308 76 aaKnown RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 THEM4Q5T1C6 240 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 NHLRC1Q6VVB1 395 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 BCDIN3DQ7Z5W3 292 aaKnown RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 GID4Q8IVV7 300 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 ZNF433Q8N7K0 673 aaPredicted RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 NPEPL1Q8NDH3 523 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 OR2T4Q8NH00 348 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 RHOXF1Q8NHV9 184 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 SNX18Q96RF0 628 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 NUAK2Q9H093 628 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 MYOZ1Q9NP98 299 aaPredicted RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 GLTPQ9NZD2 209 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 VSX1Q9NZR4 365 aaPredicted RBP11.86□□□□□ -0.51
SEC13-205ENST00000397101 SLC25A15Q9Y619 301 aa11.86□□□□□ -0.51
SEC13-205ENST00000397101 A0A1W2PPL8 197 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 OR6C65A6NJZ3 312 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 CENPBD1B2RD01 187 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 AHCYL1O43865 530 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 FAM20BO75063 409 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ENTPD6O75354 484 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 GYPBP06028 91 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 CFPP27918 469 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 PYCR1P32322 319 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ATP6V1E1P36543 226 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF84P51523 738 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 FMODQ06828 376 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 CDK5R2Q13319 367 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 APOFQ13790 326 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 OCLNQ16625 522 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF362Q5T0B9 420 aaPredicted RBP11.85□□□□□ -0.51
SEC13-205ENST00000397101 LCN1P1Q5VSP4 162 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 NXNL2Q5VZ03 156 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 B3GLCTQ6Y288 498 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.85□□□□□ -0.51
SEC13-205ENST00000397101 WDFY1Q8IWB7 410 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 C20orf196Q8IYI0 205 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF786Q8N393 782 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZNF540Q8NDQ6 660 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 BBS1Q8NFJ9 593 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 BPIFB6Q8NFQ5 453 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 OR51L1Q8NGJ5 315 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 ZFAND2BQ8WV99 257 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 RFKQ969G6 155 aa11.85□□□□□ -0.51
SEC13-205ENST00000397101 TMEM54Q969K7 222 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms