RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 TRBV2A0A0J9YWF9 115 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 CCR9P51686 369 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 TDGF1P3P51864 188 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 CXADRP78310 365 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 MFGE8Q08431 387 aaPredicted RBP11.19□□□□□ -0.62
TRIM39-204ENST00000396548 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.19□□□□□ -0.62
TRIM39-204ENST00000396548 CATSPERDQ86XM0 798 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 GPR137CQ8N3F9 429 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 OR13C5Q8NGS8 318 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 FAM122AQ96E09 287 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 FBXO17Q96EF6 278 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 PDCD1LG2Q9BQ51 273 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 G6PC2Q9NQR9 355 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 SLC7A10Q9NS82 523 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 PARPBPQ9NWS1 579 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 TUBD1Q9UJT1 453 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
TRIM39-204ENST00000396548 CD8B2A6NJW9 211 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 GPRIN2O60269 458 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 MRPL33O75394 65 aaKnown RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CD8BP10966 210 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 NRN1LQ496H8 165 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 FAM220AQ7Z4H9 259 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 MS4A15Q8N5U1 240 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 C4orf45Q96LM5 186 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 ALKBH3Q96Q83 286 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 RBM24Q9BX46 236 aaKnown RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 MROQ9BYG7 248 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 C1orf198Q9H425 327 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 IKZF2Q9UKS7 526 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CLEC4AQ9UMR7 237 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 TMCC2O75069 709 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 INHBBP09529 407 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 FCGR2AP12318 317 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 NPR2P20594 1047 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CTSSP25774 331 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CCDC92Q53HC0 331 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 WDR38Q5JTN6 314 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 MED12LQ86YW9 2145 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 OR10H5Q8NGA6 315 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 GMPPAQ96IJ6 420 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 FAM206AQ9NX38 181 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 ASH2LQ9UBL3 628 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 NCOA6Q14686 2063 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 OR6C65A6NJZ3 312 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 AHRRA9YTQ3 701 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 RPP14O95059 124 aaKnown RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 IL1AP01583 271 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 SERPINB10P48595 397 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF84P51523 738 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 KRTAP27-1Q3LI81 207 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 ACSF3Q4G176 576 aaPredicted RBP11.18□□□□□ -0.62
TRIM39-204ENST00000396548 CHMP1BQ7LBR1 199 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 KRT77Q7Z794 578 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF281Q9Y2X9 895 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 R4GMQ9 66 aa11.18□□□□□ -0.62
TRIM39-204ENST00000396548 RER1O15258 196 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 CLPXO76031 633 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 CST2P09228 141 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 ROR2Q01974 943 aaKnown RBP11.17□□□□□ -0.62
TRIM39-204ENST00000396548 YIF1BQ5BJH7 314 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 OR7E24Q6IFN5 339 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 SEM1Q6ZVN7 128 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 KCTD7Q96MP8 289 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
TRIM39-204ENST00000396548 B3GAT2Q9NPZ5 323 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 ZNF224Q9NZL3 707 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 PIEZO1Q92508 2521 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 FAM87AP0C7U9 286 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 MMP16P51512 607 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 RIDAP52758 137 aaKnown RBP11.17□□□□□ -0.62
TRIM39-204ENST00000396548 SGCAQ16586 387 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 CEACAM16Q2WEN9 425 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 ACSM3Q53FZ2 586 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 RTL6Q6ICC9 239 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 SPATC1Q76KD6 591 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 WNT2BQ93097 391 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 PPP1R14AQ96A00 147 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 SLC25A46Q96AG3 418 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 A3GALT2U3KPV4 340 aa11.17□□□□□ -0.62
TRIM39-204ENST00000396548 URB1O60287 2271 aaKnown RBP11.17□□□□□ -0.62
TRIM39-204ENST00000396548 PIN1P1O15428 100 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 UCHL1P09936 223 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 CLEC2LP0C7M8 214 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 ANOS1P23352 680 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 FOXG1P55316 489 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-204ENST00000396548 DGUOKQ16854 277 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 KRTCAP3Q53RY4 240 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 NSUN5P2Q63ZY6 315 aa11.16□□□□□ -0.62
TRIM39-204ENST00000396548 PRSS45Q7RTY3 260 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms