RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 MPC2O95563 127 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 CDK2P24941 298 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 DAP3P51398 398 aaKnown RBP12.47□□□□□ -0.41
SNCA-204ENST00000394989 ZXDAP98168 799 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ZFP36L1Q07352 338 aaKnown RBP12.47□□□□□ -0.41
SNCA-204ENST00000394989 PCK2Q16822 640 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 TMEM255AQ5JRV8 349 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 OR52N5Q8NH56 324 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ST7LQ8TDW4 575 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 MIB2Q96AX9 1013 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 HAVCR1Q96D42 359 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 DEFB126Q9BYW3 111 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 SERINC1Q9NRX5 453 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 LOC102723996A0A087X1L8 192 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 A6NIZ1 184 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ANXA2P2A6NMY6 339 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
SNCA-204ENST00000394989 PLATP00750 562 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ANXA2P07355 339 aaKnown RBP12.47□□□□□ -0.41
SNCA-204ENST00000394989 MSX1P28360 303 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 AKR1D1P51857 326 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 RAP1BP61224 184 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 RAP1AP62834 184 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 KIF26BQ2KJY2 2108 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 TIGD3Q6B0B8 471 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 FAM122CQ6P4D5 195 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 TMEM81Q6P7N7 255 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 FAM198BQ6UWH4 519 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 CATSPERDQ86XM0 798 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 OR2M3Q8NG83 312 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 POTEKPQ9BYX7 375 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 DPAGT1Q9H3H5 408 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 KLK11Q9UBX7 282 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 GTF2A1LQ9UNN4 478 aa12.47□□□□□ -0.41
SNCA-204ENST00000394989 ITGA5P08648 1049 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 DNASE1P24855 282 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 P2RY4P51582 365 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 LGALSLQ3ZCW2 172 aaPredicted RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 TRIM61Q5EBN2 209 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 KCTD18Q6PI47 426 aaPredicted RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 LINC00346Q8IVM7 164 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 SLC22A8Q8TCC7 542 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 TSEN15Q8WW01 171 aaKnown RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 SCMH1Q96GD3 660 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 ZC3H10Q96K80 434 aaKnown RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 NKX3-1Q99801 234 aaPredicted RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 GHITMQ9H3K2 345 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 PLEKHA1Q9HB21 404 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 ZFP64Q9NPA5 681 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 ELF5Q9UKW6 265 aaPredicted RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 MED12Q93074 2177 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 IGHV1-45A0A0A0MS14 117 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 IL32P24001 234 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 GRK1Q15835 563 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 DCXRQ7Z4W1 244 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 BIVMQ86UB2 503 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
SNCA-204ENST00000394989 MRI1Q9BV20 369 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 CACNG6Q9BXT2 260 aa12.46□□□□□ -0.41
SNCA-204ENST00000394989 A0A1W2PNV4 684 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 C7orf66A4D0T2 115 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 GABARAPH6UMI1 98 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 CYC1P08574 325 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 RAB40ALP0C0E4 278 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 STOMP27105 288 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 RIDAP52758 137 aaKnown RBP12.46□□□□□ -0.42
SNCA-204ENST00000394989 SNTB2Q13425 540 aaKnown RBP12.46□□□□□ -0.42
SNCA-204ENST00000394989 DYRK1AQ13627 763 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 TUSC1Q2TAM9 212 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 TMEM69Q5SWH9 247 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 PRAMEF20Q5VT98 475 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 CORO6Q6QEF8 472 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 NDUFAF7Q7L592 441 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 ZNF454Q8N9F8 522 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 OR2T35Q8NGX2 323 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 ASB5Q8WWX0 329 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 RAB40AQ8WXH6 277 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 ST8SIA4Q92187 359 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 SMOC1Q9H4F8 434 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 STEAP1Q9UHE8 339 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 ETV7Q9Y603 341 aa12.46□□□□□ -0.42
SNCA-204ENST00000394989 TECTAO75443 2155 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 DOK2O60496 412 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 GMDSO60547 372 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 DHFRP00374 187 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 CFPP27918 469 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 ART1P52961 327 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 BIDP55957 195 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 FTMTQ8N4E7 242 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 AGBL5Q8NDL9 886 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 MARC2Q969Z3 335 aa12.45□□□□□ -0.42
SNCA-204ENST00000394989 IMMP1LQ96LU5 166 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms