RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR51A2Q8NGJ7 313 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 OTOSQ8NHW6 89 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 LRFN5Q96NI6 719 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 AMELYQ99218 206 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 ZNF416Q9BWM5 594 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 EVA1AQ9H8M9 152 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 RHBDD3Q9Y3P4 386 aa14.58□□□□□ -0.07
PCDH1-203ENST00000394536 KIF26BQ2KJY2 2108 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 PRSS37A4D1T9 235 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 SLC17A2O00624 439 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 TLX3O43711 291 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 RPS27AP62979 156 aaKnown RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 UBA52P62987 128 aaKnown RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 FMODQ06828 376 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 IL10RAQ13651 578 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 TMEM92Q6UXU6 159 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 ADGRE4PQ86SQ3 457 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 CDH26Q8IXH8 852 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 OR5D14Q8NGL3 314 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 ADAMTS18Q8TE60 1221 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF775Q96BV0 537 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 CTDSPLO15194 276 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 IL32P24001 234 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 RBMXP38159 391 aaKnown RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 SPICQ8N5J4 248 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 OR4K17Q8NGC6 315 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 OR5H2Q8NGV7 314 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 OR4K15Q8NH41 348 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 FGF11Q92914 225 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF75AQ96N20 296 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 WDR77Q9BQA1 342 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 SLC19A3Q9BZV2 496 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 PPP4R1LQ9P1A2 415 aa14.58□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF230Q9UIE0 474 aaPredicted RBP14.58□□□□□ -0.08
PCDH1-203ENST00000394536 H3BUI4 141 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 HEXBP07686 556 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 GABRA1P14867 456 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 RAB3AP20336 220 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 BDKRB2P30411 391 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 CHRFAM7AQ494W8 412 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 MESTQ5EB52 335 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 FJX1Q86VR8 437 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 BPHLQ86WA6 291 aaPredicted RBP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 ZSCAN1Q8NBB4 408 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 TMED6Q8WW62 240 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 BCL2L14Q9BZR8 327 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 SLC2A4RGQ9NR83 387 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 NSA2O95478 260 aaKnown RBP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 CTLA4P16410 223 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 PPICP45877 212 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 FOXL2P58012 376 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 UBE2IP63279 158 aaKnown RBP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 MEF2DQ14814 521 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 EEF1A1P5Q5VTE0 462 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 FAM219AQ8IW50 185 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 GVQW1Q8N7I0 195 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 NEK7Q8TDX7 302 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 FBXW5Q969U6 566 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 TM4SF19Q96DZ7 209 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 PGAM5Q96HS1 289 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 AIFM2Q9BRQ8 373 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 SARGQ9BW04 601 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 PARP12Q9H0J9 701 aaKnown RBP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF304Q9HCX3 659 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 KCNAB3O43448 404 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 CSTBP04080 98 aaKnown RBP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 MYF5P13349 255 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 GNB3P16520 340 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 BIDP55957 195 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 RPS11P62280 158 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDH1-203ENST00000394536 TOMM40LQ969M1 308 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 OR5B2Q96R09 309 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 OR8B4Q96RC9 309 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 KLF15Q9UIH9 416 aa14.57□□□□□ -0.08
PCDH1-203ENST00000394536 GLI4P10075 376 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 GAAP10253 952 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 CLDN6P56747 220 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 BAMBIQ13145 260 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 DHRS2Q13268 280 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF141Q15928 474 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 SLC25A24Q6NUK1 477 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 GALNT16Q8N428 558 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 URM1Q9BTM9 101 aaKnown RBP14.56□□□□□ -0.08
PCDH1-203ENST00000394536 C14orf166Q9Y224 244 aaKnown RBP14.56□□□□□ -0.08
PCDH1-203ENST00000394536 PLXNA4Q9HCM2 1894 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 TMEM272A0A1B0GTI8 110 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 J3QRE1 110 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 ALOX12BO75342 701 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 NMBP08949 121 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 H2BFSP57053 126 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 EGR3Q06889 387 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 ZNF616Q08AN1 781 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 CEBPEQ15744 281 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 PRTGQ2VWP7 1150 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 EIF5AL1Q6IS14 154 aaKnown RBP14.56□□□□□ -0.08
PCDH1-203ENST00000394536 OR51T1Q8NGJ9 327 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 MAFIPQ8WZ33 124 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 ARL11Q969Q4 196 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 SUSD2Q9UGT4 822 aa14.56□□□□□ -0.08
PCDH1-203ENST00000394536 HIF3AQ9Y2N7 669 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms