RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 OR4A4PQ8NGN8 299 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 STOML3Q8TAV4 291 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 BAHD1Q8TBE0 780 aaPredicted RBP10.05□□□□□ -0.8
CUX1-204ENST00000393824 SNX33Q8WV41 574 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 COMMD9Q9P000 198 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 UPB1Q9UBR1 384 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 LOC390937A0A1W2PQ73 354 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 GLOD5A6NK44 160 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 LYPD3O95274 346 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 IFNGP01579 166 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 GYPBP06028 91 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 TMIGD3P0DMS9 266 aaPredicted RBP10.05□□□□□ -0.8
CUX1-204ENST00000393824 ZNF44P15621 663 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 HLA-GP17693 338 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 PTNP21246 168 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 NFYBP25208 207 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 CASRP41180 1078 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 MFSD12Q6NUT3 480 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 IL34Q6ZMJ4 242 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 ZNF574Q6ZN55 896 aaPredicted RBP10.05□□□□□ -0.8
CUX1-204ENST00000393824 ZNF836Q6ZNA1 936 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 NAA40Q86UY6 237 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 STEAP2Q8NFT2 490 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 PFN4Q8NHR9 129 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 TTTY10Q9BZA0 68 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 POFUT1Q9H488 388 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 MMP26Q9NRE1 261 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 LHX6Q9UPM6 363 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 PLEKHA6Q9Y2H5 1048 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 WDR45Q9Y484 360 aa10.05□□□□□ -0.8
CUX1-204ENST00000393824 LOC400499M0QZD8 3231 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 A0A0J9YY10 115 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 FAM221BA6H8Z2 402 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 GGT3PA6NGU5 568 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 F5H0A9 414 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 F8VVB4 439 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 F8VWA3 439 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 STMND1H3BQB6 276 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SULT2B1O00204 365 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 TO15178 435 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 ERI3O43414 337 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 GDF9O60383 454 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 FADS1O60427 444 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 PRKRAO75569 313 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 ANXA2P07355 339 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 GTF2F2P13984 249 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RPS4Y1P22090 263 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 PTGER1P34995 402 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 DLSTP36957 453 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 CDNFQ49AH0 187 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 LIPNQ5VXI9 398 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 NDUFAF7Q7L592 441 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 MAMDC2Q7Z304 686 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 ZNF561Q8N587 486 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 CLEC1AQ8NC01 280 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SDR9C7Q8NEX9 313 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 OR5AP2Q8NGF4 316 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SLC22A18Q96BI1 424 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 TMEM41AQ96HV5 264 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 CNN2Q99439 309 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 SLC25A21Q9BQT8 299 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 PARD6AQ9NPB6 346 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 GHRLQ9UBU3 117 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 GNG8Q9UK08 70 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 ENTPD2Q9Y5L3 495 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RALGAPA1Q6GYQ0 2036 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 A0A1B0GV90 55 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 H0YGG7 62 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 TERTO14746 1132 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 GPR37O15354 613 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 CER1O95813 267 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 DBIP07108 87 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 AGAP20933 346 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 CSRP1P21291 193 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 ARF3P61204 181 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 RNF4P78317 190 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 NAAAQ02083 359 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 LTBQ06643 244 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 TAF13Q15543 124 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 ZNF750Q32MQ0 723 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 PLEKHN1Q494U1 663 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 BEX5Q5H9J7 111 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 PRAMEF17Q5VTA0 474 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 ANKRD16Q6P6B7 361 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SLC35F2Q8IXU6 374 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RCBTB1Q8NDN9 531 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 OR13C2Q8NGS9 318 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 OR9A2Q8NGT5 310 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RGP1Q92546 391 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 BPIFA2Q96DR5 249 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 ZMYND19Q96E35 227 aaPredicted RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 SLITRK2Q9H156 845 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 RCC2Q9P258 522 aaKnown RBP10.04□□□□□ -0.8
CUX1-204ENST00000393824 NCDNQ9UBB6 729 aa10.04□□□□□ -0.8
CUX1-204ENST00000393824 SERTAD3Q9UJW9 196 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms