RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NIPAL2Q9H841 368 aa11.54□□□□□ -0.56
USP44-202ENST00000393091 NPAP1Q9NZP6 1156 aa11.54□□□□□ -0.56
USP44-202ENST00000393091 H2AFY2Q9P0M6 372 aaPredicted RBP11.54□□□□□ -0.56
USP44-202ENST00000393091 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 A0A1W2PPL8 197 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 EFCAB10A6NFE3 127 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 RAD51DO75771 328 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 SULT1C4O75897 302 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 PTAFRP25105 342 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 OPRL1P41146 370 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 PSG4Q00888 419 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 ZNF91Q05481 1191 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 UGT2A3Q6UWM9 527 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 KCTD20Q7Z5Y7 419 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 OR10S1Q8NGN2 331 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 LGALS12Q96DT0 336 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 MAP6Q96JE9 813 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 CIB4A0PJX0 185 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 GRNP28799 593 aaKnown RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 IRF3Q14653 427 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 ELFN2Q5R3F8 820 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 MDP1Q86V88 176 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 MUCL1Q96DR8 90 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 CCNB1IP1Q9NPC3 277 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 CACNA1CQ13936 2221 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 ZNF593O00488 134 aaPredicted RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 UBE2NP61088 152 aaKnown RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 RSPO1Q2MKA7 263 aaPredicted RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 SYS1Q8N2H4 156 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 ZNF485Q8NCK3 441 aa11.53□□□□□ -0.56
USP44-202ENST00000393091 GDF2Q9UK05 429 aaPredicted RBP11.53□□□□□ -0.56
USP44-202ENST00000393091 A0A1B0GWJ7 208 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 MPZL1O95297 269 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 GRB2P62993 217 aaKnown RBP11.52□□□□□ -0.57
USP44-202ENST00000393091 CDONQ4KMG0 1287 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 BEX5Q5H9J7 111 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 OR52N5Q8NH56 324 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 CDCA4Q9BXL8 241 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 ABHD16AO95870 558 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 CD1AP06126 327 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 ZNF823P16415 610 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 ZNF32P17041 273 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 HOXC12P31275 282 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 KIR2DL3P43628 341 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 RAB1AP62820 205 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 ADAM8P78325 824 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 ACSM1Q08AH1 577 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 PRSS45Q7RTY3 260 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 SLC35F2Q8IXU6 374 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 RNFT2Q96EX2 444 aa11.52□□□□□ -0.57
USP44-202ENST00000393091 TUBAL3A6NHL2 446 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 IGLV3-1P01715 115 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 RGS6P49758 472 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SLC35A2P78381 396 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 IL5RAQ01344 420 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 CPEB3Q8NE35 698 aaKnown RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 OR10H5Q8NGA6 315 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 OR4F15Q8NGB8 312 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 OR52I1Q8NGK6 324 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 RNF166Q96A37 237 aaPredicted RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 C1QTNF5Q9BXJ0 243 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SVILO95425 2214 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 ZNF878C9JN71 531 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 M0R129 80 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 DCKP27707 260 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SGCAQ16586 387 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 CFAP77Q6ZQR2 320 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 ZNF511Q8NB15 262 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 IGFBPL1Q8WX77 278 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 GGHQ92820 318 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 COG8Q96MW5 612 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 OR8B4Q96RC9 309 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 EMC7Q9NPA0 242 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 EXOSC1Q9Y3B2 195 aaKnown RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SLC1A7O00341 560 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SIAH2O43255 324 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 SGCEO43556 437 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 RAB36O95755 333 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 APOC1P02654 83 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 GYPBP06028 91 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 CRHBPP24387 322 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 ZNF85Q03923 595 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 GALEQ14376 348 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 MYO7BQ6PIF6 2116 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 BCDIN3DQ7Z5W3 292 aaKnown RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 ZMYND19Q96E35 227 aaPredicted RBP11.51□□□□□ -0.57
USP44-202ENST00000393091 KCNJ15Q99712 375 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 ABHD6Q9BV23 337 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 OR51V1Q9H2C8 321 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 ZNF442Q9H7R0 627 aa11.51□□□□□ -0.57
USP44-202ENST00000393091 UBAP1Q9NZ09 502 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms