RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MFSD12Q6NUT3 480 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 TMPPEQ6ZT21 453 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 PPP1R3BQ86XI6 285 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 OR10AC1Q8NH08 325 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 S100PBPQ96BU1 408 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF681Q96N22 645 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF350Q9GZX5 532 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 OR2S2Q9NQN1 319 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC23A2Q9UGH3 650 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 KCNE5Q9UJ90 142 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 KCNG2Q9UJ96 466 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 LOC100289279A0A1B0GTE1 492 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 A0A1B0GTH9 108 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 C13orf42A0A1B0GVH6 325 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 A0A1B0GVT2 93 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 EIF1AYO14602 144 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 CLEC3AO75596 197 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 ARG1P05089 322 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 COX5BP10606 129 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 C6P13671 934 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 DDTP30046 118 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 MAS1LP35410 378 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 KIAA0141Q14154 515 aaPredicted RBP13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF547Q8IVP9 402 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 NPEPL1Q8NDH3 523 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 OR56B1Q8NGI3 324 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 CASTOR1Q8WTX7 329 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 CA5BP1Q8WTZ4 195 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 MRGPRFQ96AM1 343 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 RBM18Q96H35 190 aaKnown RBP13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 MACROD1Q9BQ69 325 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 C2orf88Q9BSF0 95 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 TMED7Q9Y3B3 224 aa13.23□□□□□ -0.29
VPS9D1-201ENST00000389386 SERPINA5P05154 406 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 CSN2P05814 226 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 HNRNPA1P09651 372 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TACSTD2P09758 323 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 SERPINF1P36955 418 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ZNF595Q8IYB9 648 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 SUSD6Q92537 303 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TMEM106AQ96A25 262 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 NMNAT3Q96T66 252 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 SDF2Q99470 211 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 DPEP2Q9H4A9 486 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 DEC1Q9P2X7 70 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 MRM2Q9UI43 246 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 MRPS33Q9Y291 106 aaKnown RBP13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 GON4LQ3T8J9 2241 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3BA6NDS4 549 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 BTBD17A6NE02 478 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 OR52A4PA6NMU1 304 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 M0R036 132 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 OR10H2O60403 315 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ADH1CP00326 375 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ERGP11308 486 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ID4P47928 161 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 SKP1P63208 163 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 RAB11BQ15907 218 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ACOT4Q8N9L9 421 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ZPLD1Q8TCW7 415 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 GRHL3Q8TE85 626 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 ASB17Q8WXJ9 295 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 CDC6Q99741 560 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 C20orf24Q9BUV8 137 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 NMES1Q9C002 83 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 SLCO5A1Q9H2Y9 848 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 LMAN1LQ9HAT1 526 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TM7SF3Q9NS93 570 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 CBY1Q9Y3M2 126 aa13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 TMEM184BQ9Y519 407 aaPredicted RBP13.22□□□□□ -0.29
VPS9D1-201ENST00000389386 A0A1W2PPC1 479 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR4C45A6NMZ5 311 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 IFNA10P01566 189 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 NGFRP08138 427 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 FBXO45P0C2W1 286 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 HIST1H1TP22492 207 aaPredicted RBP13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 CSNK1G2P78368 415 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 DUSP5Q16690 384 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 GAB4Q2WGN9 574 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC35D3Q5M8T2 416 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR7G2Q8NG99 324 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR51A4Q8NGJ6 313 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 NUS1Q96E22 293 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 NMNAT2Q9BZQ4 307 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 SYT4Q9H2B2 425 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 OR52A5Q9H2C5 316 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 PRDM7Q9NQW5 492 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 PARP11Q9NR21 331 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 SLC2A8Q9NY64 477 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 COL6A3P12111 3177 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3DA0A087WVF3 549 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3IA0A087WXS9 549 aa13.21□□□□□ -0.29
VPS9D1-201ENST00000389386 TBC1D3LB9A6J9 549 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms