RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 GGTLC1Q9BX51 225 aa0.39□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TRIM45Q9H8W5 580 aaPredicted RBP0.39□□□□□ -2.35
RNU6-1040P-201ENST00000383974 AURKCQ9UQB9 309 aa0.39□□□□□ -2.35
RNU6-1040P-201ENST00000383974 YARS2Q9Y2Z4 477 aaKnown RBP0.39□□□□□ -2.35
RNU6-1040P-201ENST00000383974 N6AMT1Q9Y5N5 214 aa0.39□□□□□ -2.35
RNU6-1040P-201ENST00000383974 OR6C74A6NCV1 312 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 C2P06681 752 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ACSM4P0C7M7 580 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 RGS4P49798 205 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SLC9A3R2Q15599 337 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 USH1GQ495M9 461 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KLHL12Q53G59 568 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 YIF1BQ5BJH7 314 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SLC10A5Q5PT55 438 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 AMMECR1LQ6DCA0 310 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MGARPQ8TDB4 240 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 GALNT14Q96FL9 552 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SH3GL1Q99961 368 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MFFQ9GZY8 342 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KCNJ16Q9NPI9 418 aa0.38□□□□□ -2.35
RNU6-1040P-201ENST00000383974 OR5H1A6NKK0 313 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 AQP9O43315 295 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ERLIN2O94905 339 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 AK1P00568 194 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 OR5H8P0DN80 308 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 IL10P22301 178 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PPT1P50897 306 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CDKN2DP55273 166 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MXD1Q05195 221 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 BIKQ13323 160 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TPBGQ13641 420 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 RCAN2Q14206 197 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DMC1Q14565 340 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TCEAL5Q5H9L2 206 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TTC23Q5W5X9 447 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TTC19Q6DKK2 380 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 STK40Q8N2I9 435 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ZNF713Q8N859 430 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ANKFN1Q8N957 763 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MUC7Q8TAX7 377 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TCEAL3Q969E4 200 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CPNE4Q96A23 557 aaPredicted RBP0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 IGF2BP2-AS1Q96M15 143 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MTMR9Q96QG7 549 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PPA2Q9H2U2 334 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SMOXQ9NWM0 555 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CHRNA9Q9UGM1 479 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ST3GAL6Q9Y274 331 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 FBN2P35556 2912 aa0.37□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PNPLA6Q8IY17 1366 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 RP1L1Q8IWN7 2480 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 METTL21EPA6NDL7 271 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PRAMEF26H0Y7S4 382 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 EIF1BO60739 113 aaKnown RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DPM1O60762 260 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SEC22BO75396 215 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 C1orf105O95561 183 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PAHP00439 452 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 MT-ND3P03897 115 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CSRP1P21291 193 aaKnown RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 EIF1P41567 113 aaKnown RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 HCAR3P49019 387 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 FBXW4P57775 412 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KRTAP10-4P60372 401 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 PPIL2Q13356 520 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CPTPQ5TA50 214 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DEGS2Q6QHC5 323 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DHDDSQ86SQ9 333 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 LIX1Q8N485 282 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 OR11H7Q8NGC8 314 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CNDP1Q96KN2 507 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DUSP21Q9H596 190 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 NIPAL2Q9H841 368 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CSNK1G1Q9HCP0 422 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TRMT112Q9UI30 125 aaKnown RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KNSTRNQ9Y448 316 aa0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 BAZ2AQ9UIF9 1905 aaKnown RBP0.36□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KRT87PA6NCN2 255 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 KRBOX1C9JBD0 128 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 H7C417 338 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 L7N2F9 121 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ZNF73O43830 326 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 GLSO94925 669 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SCELO95171 688 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 LCA5LO95447 670 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 FSTL3O95633 263 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 CTSLP07711 333 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 RAB3AP20336 220 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 VHLP40337 213 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 GFERP55789 205 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ZNF141Q15928 474 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 SOHLH1Q5JUK2 328 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 ZNF470Q6ECI4 717 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 OR4F3Q6IEY1 312 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 APOBEC3HQ6NTF7 200 aaKnown RBP0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TCF24Q7RTU0 167 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 DAZ4Q86SG3 579 aaKnown RBP0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 TMEM25Q86YD3 366 aa0.35□□□□□ -2.35
RNU6-1040P-201ENST00000383974 EGFL6Q8IUX8 553 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms