RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 A0A1W2PPB8 328 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 A0A1W2PRS3 328 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 KIR3DP1A8MWS1 328 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 P2RY4P51582 365 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 NHLRC1Q6VVB1 395 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 ADPRHL1Q8NDY3 354 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 ZNF680Q8NEM1 530 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 BEST4Q8NFU0 473 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 MIB2Q96AX9 1013 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 KCNK17Q96T54 332 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 CACNG6Q9BXT2 260 aa17.33■□□□□ 0.37
SSU72-204ENST00000378726 MRM2Q9UI43 246 aaKnown RBP17.33■□□□□ 0.37
SSU72-204ENST00000378726 COA3Q9Y2R0 106 aaPredicted RBP17.33■□□□□ 0.37
SSU72-204ENST00000378726 MT-ND4P03905 459 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 TPOP07202 933 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 OR8G3PP0DMU2 310 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 NAT1P18440 290 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 BIDP55957 195 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 ST3GAL2Q16842 350 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 PRSS45Q7RTY3 260 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.33■□□□□ 0.36
SSU72-204ENST00000378726 GPAT4Q86UL3 456 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 UEVLDQ8IX04 471 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 HAVCR2Q8TDQ0 301 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 MARVELD3Q96A59 401 aa17.33■□□□□ 0.36
SSU72-204ENST00000378726 MRPL22Q9NWU5 206 aaKnown RBP17.33■□□□□ 0.36
SSU72-204ENST00000378726 ING1Q9UK53 422 aaPredicted RBP17.33■□□□□ 0.36
SSU72-204ENST00000378726 ZNF814B7Z6K7 855 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 UBL3O95164 117 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 RAF1P04049 648 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 ITGA3P26006 1051 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 MMP15P51511 669 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 GPR85P60893 370 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 SLC35A1P78382 337 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 GSG1Q2KHT4 349 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 SPINK14Q6IE38 97 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 TMPRSS12Q86WS5 348 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 OR8H3Q8N146 312 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 TEX19Q8NA77 164 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 OTOSQ8NHW6 89 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 IP6K3Q96PC2 410 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 LRFN1Q9P244 771 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 KCNG2Q9UJ96 466 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 IKZF2Q9UKS7 526 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 CNTRLQ7Z7A1 2325 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 RPP14O95059 124 aaKnown RBP17.32■□□□□ 0.36
SSU72-204ENST00000378726 CD1AP06126 327 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 CD96P40200 585 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 GLO1Q04760 184 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 TOR2AQ5JU69 321 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 ABHD17BQ5VST6 288 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 LIPNQ5VXI9 398 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 FAM220AQ7Z4H9 259 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 IZUMO1Q8IYV9 350 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 PDCD1LG2Q9BQ51 273 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 BEX1Q9HBH7 125 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 BRD7Q9NPI1 651 aa17.32■□□□□ 0.36
SSU72-204ENST00000378726 DOCK10Q96BY6 2186 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 LINC00862A6NCI5 91 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 SERPINA3P01011 423 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 EPXP11678 715 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 SRD5A2P31213 254 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 FMODQ06828 376 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 EGR3Q06889 387 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 TGIF1Q15583 401 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 LUZP2Q86TE4 346 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 IQCF2Q8IXL9 164 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 GIMAP1Q8WWP7 306 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 RNF166Q96A37 237 aaPredicted RBP17.31■□□□□ 0.36
SSU72-204ENST00000378726 OXGR1Q96P68 337 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 PIGQQ9BRB3 760 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 DEPPQ9NTK1 212 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 GPR171O14626 319 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 UPK3AO75631 287 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 MPZL1O95297 269 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 PMS2P2O95744 297 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 H2AFB2P0C5Z0 115 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 NANOS3P60323 173 aaKnown RBP17.31■□□□□ 0.36
SSU72-204ENST00000378726 ADAM8P78325 824 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 DNM1P34Q6PK57 102 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 PRRX2Q99811 253 aa17.31■□□□□ 0.36
SSU72-204ENST00000378726 TRAV1-2A0A0B4J238 106 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 AQP7P3A6NL99 342 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 PHYHO14832 338 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 RAMP1O60894 148 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 RFPL3SP0C7P2 107 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 ZNF17P17021 662 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 KLK2P20151 261 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 CNR1P21554 472 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 ENPP1P22413 925 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 RAC1P63000 192 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 PITPNAQ00169 270 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 AIMP2Q13155 320 aaKnown RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 CAMK2DQ13557 499 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 ZNF239Q16600 458 aaKnown RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 MEP1BQ16820 701 aa17.3■□□□□ 0.36
SSU72-204ENST00000378726 LGALSLQ3ZCW2 172 aaPredicted RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 YRDCQ86U90 279 aaKnown RBP17.3■□□□□ 0.36
SSU72-204ENST00000378726 DTX1Q86Y01 620 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms