RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CEP170BQ9Y4F5 1589 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 LOC107984156A0A0G2JMH3 177 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 BLACEA4D250 179 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ADAMTS4O75173 837 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CSO75390 466 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 GLCEO94923 617 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 GSTP1P09211 210 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 CD1BP29016 333 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ILKQ13418 452 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 NIT1Q86X76 327 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ARL17AQ8IVW1 177 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 OR5AS1Q8N127 324 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MTMR14Q8NCE2 650 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MYOZ3Q8TDC0 251 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MARCH5Q9NX47 278 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CDC42EP3Q9UKI2 254 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 RP1L1Q8IWN7 2480 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 NSG1A0A0A6YYJ2 146 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 LEUTXA8MZ59 168 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 TYMSP04818 313 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 PGA4P0DJD7 388 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 PGA5P0DJD9 388 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 RPS25P62851 125 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 OR4C11Q6IEV9 310 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 FRMPD2BQ6IN97 320 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 TFAP2EQ6VUC0 442 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 NPSR1Q6W5P4 371 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 GHSRQ92847 366 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ELOVL3Q9HB03 270 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 POLMQ9NP87 494 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 CTSFQ9UBX1 484 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 LPAR3Q9UBY5 353 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 AGLP35573 1532 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ABCD4O14678 606 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ASPGQ86U10 573 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ACOT4Q8N9L9 421 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 BEND2Q8NDZ0 799 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 TMEM106AQ96A25 262 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 DPH7Q9BTV6 452 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ST6GALNAC4Q9H4F1 302 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SOWAHBA6NEL2 793 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SOX15O60248 233 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 GYPAP02724 150 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CASP7P55210 303 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SP3Q02447 781 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 OR1C1Q15619 314 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 PHLDA2Q53GA4 152 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SLC35E4Q6ICL7 350 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 NXF5Q9H1B4 397 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 GNG12Q9UBI6 72 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MRPS28Q9Y2Q9 187 aaKnown RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 PRR36Q9H6K5 1346 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 LRP3O75074 770 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CPNE6O95741 557 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 NCBP2-AS2Q69YL0 99 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 TMPRSS13Q9BYE2 586 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 FLVCR1Q9Y5Y0 555 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MEIS2O14770 477 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 ST8SIA5O15466 376 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 HHEXQ03014 270 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 DOC2BQ14184 412 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 CCDC190Q86UF4 302 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 HGDQ93099 445 aa8.06□□□□□ -1.12
LIG3-202ENST00000378526 MBD1Q9UIS9 605 aaPredicted RBP8.06□□□□□ -1.12
LIG3-202ENST00000378526 ZC3H12DA2A288 527 aaKnown RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 FOXE1O00358 373 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 MAN2B1O00754 1011 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PIPP12273 146 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 PRRX1P54821 245 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PDE7AQ13946 482 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 SLC35D3Q5M8T2 416 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 GLIS3Q8NEA6 775 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 HUS1BQ8NHY5 278 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 NUDCD2Q8WVJ2 157 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 RTN4IP1Q8WWV3 396 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 NTMT1Q9BV86 223 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 AMBRA1Q9C0C7 1298 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 OPN3Q9H1Y3 402 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 HS3ST4Q9Y661 456 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 TISP43B9A030 160 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ARPC3O15145 178 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 CTSAP10619 480 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ARRB2P32121 409 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 IKZF1Q13422 519 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ZNF600Q6ZNG1 722 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 LHFPL4Q7Z7J7 247 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ACY3Q96HD9 319 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 TIMM9Q9Y5J7 89 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 MBTPS2O43462 519 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 GPR37L1O60883 481 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 PPP1R11O60927 126 aaPredicted RBP8.05□□□□□ -1.12
LIG3-202ENST00000378526 GDF5P43026 501 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 ARSDP51689 593 aa8.05□□□□□ -1.12
LIG3-202ENST00000378526 FZD2Q14332 565 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms