RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TRBV4-1A0A0J9YWV2 114 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3HP0C7X1 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SOX2P48431 317 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 PRRX1P54821 245 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 DCDP81605 110 aaKnown RBP10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM95Q3KNT9 176 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SLC36A2Q495M3 483 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 TBC1D3GQ6DHY5 549 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 Q6ZVL8 140 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 AMZ2Q86W34 360 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 C1QL4Q86Z23 238 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 CMTM8Q8IZV2 173 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 OR2T33Q8NG76 320 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SLC25A28Q96A46 364 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 CXorf40BQ96DE9 158 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 PIK3IP1Q96FE7 263 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 PCED1AQ9H1Q7 454 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 CHST11Q9NPF2 352 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 DEC1Q9P2X7 70 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 KCNE5Q9UJ90 142 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 IKZF2Q9UKS7 526 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 SMCHD1A6NHR9 2005 aa10.76□□□□□ -0.69
NPHP4-202ENST00000378161 A0A087WV62 115 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 UPK3BL1B0FP48 263 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 UPK3BL2E5RIL1 263 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 TK1P04183 234 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 TAS2R38P59533 333 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 HSF1Q00613 529 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 GAS6Q14393 721 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ACOT6Q3I5F7 207 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC25A35Q3KQZ1 300 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 PET117Q6UWS5 81 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 PRICKLE2Q7Z3G6 844 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR51Q1Q8NH59 317 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR51F2Q8NH61 342 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 IL22RA2Q969J5 263 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ECHDC3Q96DC8 303 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 GALNT14Q96FL9 552 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 LCORQ96JN0 433 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 IL26Q9NPH9 171 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC22A31A6NKX4 558 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 HHLA1C9JL84 531 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 F13BP05160 661 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 GPX2P18283 190 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR3A2P47893 321 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 LSM11P83369 360 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 DCAF12L2Q5VW00 463 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR4A47Q6IF82 309 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 BTNL3Q6UXE8 466 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 NPSR1Q6W5P4 371 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 CALHM3Q86XJ0 350 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR1P1Q8NH06 330 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 EVPLQ92817 2033 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC25A18Q9H1K4 315 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM9BQ9NQ34 198 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 AMDHD2Q9Y303 409 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 KIF13BQ9NQT8 1826 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SERTM2A0A1B0GWG4 89 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 FAM227AF5H4B4 570 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 H7BY64 318 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ADH1BP00325 375 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 IFNA1P01562 189 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 NCBP2P52298 156 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 CLDN12P56749 244 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 NAAAQ02083 359 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 FAM219BQ5XKK7 198 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 KCNIP4Q6PIL6 250 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OPN5Q6U736 354 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 TMEM207Q6UWW9 146 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 MTURNQ8N3F0 131 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR5AP2Q8NGF4 316 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR4C16Q8NGL9 310 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR1L6Q8NGR2 347 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SH3RF2Q8TEC5 729 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SHDQ96IW2 340 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC25A31Q9H0C2 315 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 COLEC10Q9Y6Z7 277 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC35G6P0C7Q6 338 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 CSNK2A2P19784 350 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 TFPI2P48307 235 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 DRAM2Q6UX65 266 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC39A5Q6ZMH5 540 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF429Q86V71 674 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ZNF676Q8N7Q3 588 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 OR14L1PQ8NHC6 308 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 RNASE8Q8TDE3 154 aaKnown RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 RGP1Q92546 391 aaPredicted RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 DPF1Q92782 380 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 APH1AQ96BI3 265 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 DNAJA3Q96EY1 480 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 PTPN18Q99952 460 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 ACER3Q9NUN7 267 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 FBXW2Q9UKT8 454 aa10.75□□□□□ -0.69
NPHP4-202ENST00000378161 LSM2Q9Y333 95 aaKnown RBP10.75□□□□□ -0.69
NPHP4-202ENST00000378161 SLC5A10A0PJK1 596 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 OR2W5A6NFC9 320 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 RAB27BO00194 218 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 RAB29O14966 203 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 CA11O75493 328 aa10.74□□□□□ -0.69
NPHP4-202ENST00000378161 OR6A2O95222 327 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms