RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 LEG1Q6P5S2 330 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 UGT2A3Q6UWM9 527 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 ZNF620Q6ZNG0 422 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 OR52L1Q8NGH7 329 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 RDH5Q92781 318 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 ASB9Q96DX5 294 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 LRGUKQ96M69 825 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 SNX18Q96RF0 628 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 TRIM15Q9C019 465 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 NUAK2Q9H093 628 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 CHODLQ9H9P2 273 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 COA3Q9Y2R0 106 aaPredicted RBP14.4□□□□□ -0.1
HMGN4-201ENST00000377575 POLR1DQ9Y2S0 133 aa14.4□□□□□ -0.1
HMGN4-201ENST00000377575 MALRD1Q5VYJ5 2156 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ABCA2Q9BZC7 2435 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 C17orf100A8MU93 164 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ABHD16AO95870 558 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 IGHV3-13P01766 116 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 HPXP02790 462 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 TACSTD2P09758 323 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 T-ENOLP0DO92 83 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ACHEP22303 614 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 CDKN2AP42771 156 aaKnown RBP14.39□□□□□ -0.11
HMGN4-201ENST00000377575 HMGA2P52926 109 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 PPP1CBP62140 327 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 RIN1Q13671 783 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ELFN2Q5R3F8 820 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 SPATA46Q5T0L3 261 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 MBNL2Q5VZF2 373 aaKnown RBP14.39□□□□□ -0.11
HMGN4-201ENST00000377575 RFPL4BQ6ZWI9 263 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 SLC25A40Q8TBP6 338 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 CCDC124Q96CT7 223 aaKnown RBP14.39□□□□□ -0.11
HMGN4-201ENST00000377575 C4orf45Q96LM5 186 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 SAMD8Q96LT4 415 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 TMEM160Q9NX00 188 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 PLEK2Q9NYT0 353 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ASH2LQ9UBL3 628 aa14.39□□□□□ -0.11
HMGN4-201ENST00000377575 ANK3Q12955 4377 aaKnown RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 PLSCR5A0PG75 271 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 IDH3BO43837 385 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 NCR1O76036 304 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CCNB2O95067 398 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CENPAP49450 140 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 GLO1Q04760 184 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CHRFAM7AQ494W8 412 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 FAM166AQ6J272 317 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 VASH1Q7L8A9 365 aaPredicted RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 TRPM8Q7Z2W7 1104 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 HIPK1Q86Z02 1210 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 NPEPL1Q8NDH3 523 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 OR9Q2Q8NGE9 314 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 KLF14Q8TD94 323 aaPredicted RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 BCAS4Q8TDM0 211 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 IPCEF1Q8WWN9 437 aaPredicted RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 HPS1Q92902 700 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 MARS2Q96GW9 593 aaKnown RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 BTBD10Q9BSF8 475 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 OR2J1Q9GZK6 312 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 RACGAP1Q9H0H5 632 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 FAM53CQ9NYF3 392 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 NKIRAS2Q9NYR9 191 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CGGBP1Q9UFW8 167 aaPredicted RBP14.38□□□□□ -0.11
HMGN4-201ENST00000377575 ATPIF1Q9UII2 106 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CDC42EP3Q9UKI2 254 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 KCNS2Q9ULS6 477 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 CDH10Q9Y6N8 788 aa14.38□□□□□ -0.11
HMGN4-201ENST00000377575 LYNX1G3V0Z9 82 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 LYNX1P0DP58 116 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 HIST1H1CP16403 213 aaKnown RBP14.37□□□□□ -0.11
HMGN4-201ENST00000377575 GSTM3P21266 225 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TUBG1P23258 451 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 LIPAP38571 399 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 MAGEB1P43366 347 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 GPR6P46095 362 aaPredicted RBP14.37□□□□□ -0.11
HMGN4-201ENST00000377575 MS4A2Q01362 244 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TEKQ02763 1124 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 KCNMB1Q16558 191 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 ZMAT1Q5H9K5 638 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 OR4C15Q8NGM1 316 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 NMNAT3Q96T66 252 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 REEP1Q9H902 201 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TUBG2Q9NRH3 451 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 CYSLTR2Q9NS75 346 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 DECR2Q9NUI1 292 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TBCCD1Q9NVR7 557 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TAS2R1Q9NYW7 299 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 LPAR3Q9UBY5 353 aa14.37□□□□□ -0.11
HMGN4-201ENST00000377575 SAMHD1Q9Y3Z3 626 aaKnown RBP14.37□□□□□ -0.11
HMGN4-201ENST00000377575 TANC2Q9HCD6 1990 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 IGLV1-36A0A0B4J1U3 117 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 LOC100289279A0A1B0GTE1 492 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 LRP5LA4QPB2 252 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 TPD52L2O43399 206 aaKnown RBP14.36□□□□□ -0.11
HMGN4-201ENST00000377575 LILRA1O75019 489 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 MPZL1O95297 269 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 RAP2AP10114 183 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 GAAP10253 952 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 MPV17P39210 176 aa14.36□□□□□ -0.11
HMGN4-201ENST00000377575 ZNF81P51508 661 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms