RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 GPANK1O95872 356 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ALPLP05186 524 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ZNF35P13682 527 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 NR4A1P22736 598 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ALDH3A2P51648 485 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
UBE4B-203ENST00000377153 RCN1Q15293 331 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 MEP1BQ16820 701 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ZNF362Q5T0B9 420 aaPredicted RBP12.55□□□□□ -0.4
UBE4B-203ENST00000377153 LCN1P1Q5VSP4 162 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 TMEM236Q5W0B7 351 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ACSM5Q6NUN0 579 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 CXXC5Q7LFL8 322 aaKnown RBP12.55□□□□□ -0.4
UBE4B-203ENST00000377153 CBR4Q8N4T8 237 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 GABARAPL3Q9BY60 117 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 NMNAT2Q9BZQ4 307 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 HDHD2Q9H0R4 259 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 CBLN4Q9NTU7 201 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 USE1Q9NZ43 259 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ATPIF1Q9UII2 106 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 TMEFF2Q9UIK5 374 aaPredicted RBP12.55□□□□□ -0.4
UBE4B-203ENST00000377153 ITGB1BP2Q9UKP3 347 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 COMMD3-BMI1R4GMX3 469 aa12.55□□□□□ -0.4
UBE4B-203ENST00000377153 LRBAP50851 2863 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 ZAR1LA6NP61 321 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 TFP02787 698 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 SCG5P05408 212 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 SOD3P08294 240 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 SPARCP09486 303 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 DANCRP0C864 163 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 COX5BP10606 129 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 CCL2P13500 99 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 SERPINF1P36955 418 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 RAD52P43351 418 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 ART1P52961 327 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 KLHL12Q53G59 568 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 SLX4IPQ5VYV7 408 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 VASH1Q7L8A9 365 aaPredicted RBP12.54□□□□□ -0.4
UBE4B-203ENST00000377153 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
UBE4B-203ENST00000377153 TRMT61AQ96FX7 289 aaKnown RBP12.54□□□□□ -0.4
UBE4B-203ENST00000377153 DDOQ99489 341 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 TRAF4Q9BUZ4 470 aaPredicted RBP12.54□□□□□ -0.4
UBE4B-203ENST00000377153 BCL2L14Q9BZR8 327 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 OR51V1Q9H2C8 321 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 OR51B6Q9H340 312 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 MED20Q9H944 212 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 FBXO9Q9UK97 447 aaPredicted RBP12.54□□□□□ -0.4
UBE4B-203ENST00000377153 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 LHFPL6Q9Y693 200 aa12.54□□□□□ -0.4
UBE4B-203ENST00000377153 OR6C6A6NF89 314 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 TVP23AA6NH52 213 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 H0YHG0 523 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 RER1O15258 196 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 GLCEO94923 617 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ABHD16AO95870 558 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 LCKP06239 509 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 OR4A8P0C604 315 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 CLUP10909 449 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 PCSK6P29122 969 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 THBS4P35443 961 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 GLRXP35754 106 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ENTPD1P49961 510 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 SELENOVP59797 346 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 CDC42P60953 191 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 NKX6-1P78426 367 aaPredicted RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 HGFACQ04756 655 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ECH1Q13011 328 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 TRIP10Q15642 601 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 SLC35D3Q5M8T2 416 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 OTPQ5XKR4 325 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 CORO6Q6QEF8 472 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ERI1Q8IV48 349 aaKnown RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 LINC00346Q8IVM7 164 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 C1orf174Q8IYL3 243 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 OR1F12Q8NHA8 337 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 IPCEF1Q8WWN9 437 aaPredicted RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 POM121L2Q96KW2 1035 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 INTS14Q96SY0 518 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 PITX2Q99697 317 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ATF6BQ99941 703 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 FOXC2Q99958 501 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 GRIP2Q9C0E4 1043 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 ELOVL3Q9HB03 270 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 IMPAD1Q9NX62 359 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 H2AFY2Q9P0M6 372 aaPredicted RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
UBE4B-203ENST00000377153 PMF1-BGLAPU3KQ54 211 aa12.53□□□□□ -0.4
UBE4B-203ENST00000377153 PDZD2O15018 2839 aa12.52□□□□□ -0.4
UBE4B-203ENST00000377153 TEX15Q9BXT5 2789 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms