RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ITGA2P17301 1181 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 RHCEP18577 417 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 PSG7Q13046 419 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 THSD4Q6ZMP0 1018 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 RAB1CQ92928 201 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 RASD2Q96D21 266 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 MSL2Q9HCI7 577 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 DCAF13Q9NV06 445 aaKnown RBP12.08□□□□□ -0.48
NELFE-201ENST00000375425 TBCCD1Q9NVR7 557 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 IL20RAQ9UHF4 553 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 ZDHHC8Q9ULC8 765 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 SIGLEC7Q9Y286 467 aa12.08□□□□□ -0.48
NELFE-201ENST00000375425 TEX13CA0A0J9YWL9 993 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 H3BSA7 217 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SGCEO43556 437 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 PLPP2O43688 288 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 DOK2O60496 412 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SLC16A7O60669 478 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 DEAF1O75398 565 aaPredicted RBP12.07□□□□□ -0.48
NELFE-201ENST00000375425 DIRAS1O95057 198 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 NDUFB2O95178 105 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 MPZL1O95297 269 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 PNPP00491 289 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 ADH4P08319 380 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 COX5BP10606 129 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 OMPP47874 163 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 HTR5AP47898 357 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 LIMS1P48059 325 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SCRN3Q0VDG4 424 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 MTX3Q5HYI7 312 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 FGD3Q5JSP0 725 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 OTPQ5XKR4 325 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SHQ1Q6PI26 577 aaKnown RBP12.07□□□□□ -0.48
NELFE-201ENST00000375425 OR52J3Q8NH60 311 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 C7orf34Q96L11 122 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 NDEL1Q9GZM8 345 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 MYLK2Q9H1R3 596 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 RERGLQ9H628 205 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 SPAG4Q9NPE6 437 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 NRIP3Q9NQ35 241 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 G6PC2Q9NQR9 355 aa12.07□□□□□ -0.48
NELFE-201ENST00000375425 TRBV4-1A0A0J9YWV2 114 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 IMPA2O14732 288 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 TIMM8AO60220 97 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 AVPP01185 164 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 IGHV2-5P01817 119 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 SDHAP31040 664 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 KRR1Q13601 381 aaKnown RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 SEC23BQ15437 767 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 GPR139Q6DWJ6 353 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 C1orf229Q6ZS94 237 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 VASH1Q7L8A9 365 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 RNF148Q8N7C7 305 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 SLC7A6Q92536 515 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 DIRC2Q96SL1 478 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 SYT4Q9H2B2 425 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 PLEK2Q9NYT0 353 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 ADA2Q9NZK5 511 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 VSX1Q9NZR4 365 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 CGGBP1Q9UFW8 167 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 SAMD4AQ9UPU9 718 aaKnown RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 COA3Q9Y2R0 106 aaPredicted RBP12.06□□□□□ -0.48
NELFE-201ENST00000375425 STARD10Q9Y365 291 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 IER3IP1Q9Y5U9 82 aa12.06□□□□□ -0.48
NELFE-201ENST00000375425 GMNNO75496 209 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 KHDRBS3O75525 346 aaKnown RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 VENTXO95231 258 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 CD55P08174 381 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 GSTM3P21266 225 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 TUBG1P23258 451 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 PRDX6P30041 224 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 FXYD6P3P58550 94 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 LSM6P62312 80 aaKnown RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 TNFAIP6P98066 277 aaPredicted RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 AQP6Q13520 282 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 KRT72Q14CN4 511 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 ZMAT1Q5H9K5 638 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 DPY19L2P2Q6ZN68 376 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 PTCHD4Q6ZW05 846 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 ZNF771Q7L3S4 317 aaPredicted RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 ZER1Q7Z7L7 766 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 GLB1L2Q8IW92 636 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 FAM86B1Q8N7N1 296 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 CMBLQ96DG6 245 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 RSRC1Q96IZ7 334 aaKnown RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 GPX7Q96SL4 187 aaPredicted RBP12.05□□□□□ -0.48
NELFE-201ENST00000375425 GPA33Q99795 319 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 GAL3ST1Q99999 423 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 NUAK2Q9H093 628 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 ASH2LQ9UBL3 628 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
NELFE-201ENST00000375425 LOC105371242A0A075B767 164 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms