RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 ATRXP46100 2492 aa13.89□□□□□ -0.19
CCDC40-202ENST00000374876 C7orf66A4D0T2 115 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 MAS1P04201 325 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 SPARCP09486 303 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 ADRA2CP18825 462 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 STOMP27105 288 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 ART1P52961 327 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 FBXW4P57775 412 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 MEP1BQ16820 701 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 TMEM69Q5SWH9 247 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 OTPQ5XKR4 325 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 SLC18B1Q6NT16 456 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 SLC35D2Q76EJ3 337 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 LRRTM1Q86UE6 522 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 ELP5Q8TE02 316 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 PHF21AQ96BD5 680 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 C4orf45Q96LM5 186 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 OR8B4Q96RC9 309 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 TRAF4Q9BUZ4 470 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-202ENST00000374876 ELOVL3Q9HB03 270 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 KLHL9Q9P2J3 617 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 TP53TG5Q9Y2B4 290 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 ETV7Q9Y603 341 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 SMG1Q96Q15 3661 aaKnown RBP13.88□□□□□ -0.19
CCDC40-202ENST00000374876 C2orf72A6NCS6 295 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 GABARAPH6UMI1 98 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 C17orf67Q0P5P2 114 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 FCN2Q15485 313 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 LINC00696Q6ZRV3 163 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 DNAAF1Q8NEP3 725 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 OR51A4Q8NGJ6 313 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 OR10AC1Q8NH08 325 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 TSEN15Q8WW01 171 aaKnown RBP13.88□□□□□ -0.19
CCDC40-202ENST00000374876 FCAMRQ8WWV6 532 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 GHITMQ9H3K2 345 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 PLEKHA1Q9HB21 404 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 MRPL39Q9NYK5 338 aaKnown RBP13.88□□□□□ -0.19
CCDC40-202ENST00000374876 STMN3Q9NZ72 180 aa13.88□□□□□ -0.19
CCDC40-202ENST00000374876 IGSF10Q6WRI0 2623 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 BSNQ9UPA5 3926 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 TRBV5-7A0A0A0MS05 114 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 IGLV1-36A0A0B4J1U3 117 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 SLC22A23A1A5C7 686 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ANKUB1A6NFN9 424 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 SMLR1H3BR10 107 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 H3BSH0 61 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 GPR171O14626 319 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 SULT1B1O43704 296 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ECDO95905 644 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-202ENST00000374876 IGHMP01871 453 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 H2AFB2P0C5Z0 115 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 CTLA4P16410 223 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 AP3S2P59780 193 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ADAM8P78325 824 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 TNK1Q13470 666 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 MELKQ14680 651 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 SLC17A1Q14916 467 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 Q5BKY6 102 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 WDR38Q5JTN6 314 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 PLCZ1Q86YW0 608 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF679Q8IYX0 411 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 DND1Q8IYX4 353 aaKnown RBP13.87□□□□□ -0.19
CCDC40-202ENST00000374876 OR8K3Q8NH51 312 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 OR52I2Q8NH67 350 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ST8SIA1Q92185 356 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 THRSPQ92748 146 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 GCDHQ92947 438 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-202ENST00000374876 MIB2Q96AX9 1013 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 OR2M2Q96R28 347 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 ACTR6Q9GZN1 396 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 MRPL15Q9P015 296 aaKnown RBP13.87□□□□□ -0.19
CCDC40-202ENST00000374876 GTF2A1LQ9UNN4 478 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 FOXJ3Q9UPW0 622 aa13.87□□□□□ -0.19
CCDC40-202ENST00000374876 TRAV8-7A0A075B6U6 113 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 TRBV11-1A0A0K0K1C0 115 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 ADAM10O14672 748 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 KRT33AO76009 404 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 F10P00742 488 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 KIR3DL2P43630 455 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 FAM205BPQ63HN1 556 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 FDX2Q6P4F2 183 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 BTN2A1Q7KYR7 527 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF227Q86WZ6 799 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 NUBPLQ8TB37 319 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 HAVCR1Q96D42 359 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 OR51J1Q9H342 316 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 MRPL22Q9NWU5 206 aaKnown RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 PPIEQ9UNP9 301 aaKnown RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 RCE1Q9Y256 329 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 CNTRLQ7Z7A1 2325 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 ZNF354AO60765 605 aaPredicted RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 CDK2P24941 298 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 CRABP1P29762 137 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 PTH2RP49190 550 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 RAG2P55895 527 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 MRPS10P82664 201 aaKnown RBP13.86□□□□□ -0.19
CCDC40-202ENST00000374876 GLO1Q04760 184 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 ETFDHQ16134 617 aa13.86□□□□□ -0.19
CCDC40-202ENST00000374876 KCTD18Q6PI47 426 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms