RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SURF4O15260 269 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 SGCEO43556 437 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 TMCC2O75069 709 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 SNAP29O95721 258 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 BAG2O95816 211 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 CD8AP01732 235 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 GYPBP06028 91 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 CLUP10909 449 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF823P16415 610 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 SPI1P17947 270 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 THBS4P35443 961 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 SERPINF1P36955 418 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 GDI2P50395 445 aaKnown RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 NKX6-1P78426 367 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PQLC1Q8N2U9 271 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PAQR4Q8N4S7 273 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 GJC3Q8NFK1 279 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 ZNRF4Q8WWF5 429 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PTP4A1Q93096 173 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 POM121L2Q96KW2 1035 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 FOXC2Q99958 501 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 TRAF4Q9BUZ4 470 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 GRIP2Q9C0E4 1043 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF442Q9H7R0 627 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 MED20Q9H944 212 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 CBLN4Q9NTU7 201 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PLEK2Q9NYT0 353 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 TMEFF2Q9UIK5 374 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 LOC100509620A0A075B734 347 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 C5orf49A4QMS7 147 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PRR23D1E9PI22 279 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 ATP6V1G2O95670 118 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 OR4A8P0C604 315 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PRR23D2P0DMB1 279 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 FMO3P31513 532 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 GLRXP35754 106 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PPP2R2BQ00005 443 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 ADIPOQQ15848 244 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 SNAPC1Q16533 368 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 OR6K6Q8NGW6 343 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 OR2AJ1Q8NGZ0 328 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 HCAR1Q9BXC0 346 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 MRPL22Q9NWU5 206 aaKnown RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 NDRG4Q9ULP0 352 aaKnown RBP13.8□□□□□ -0.2
HDHD3-202ENST00000374180 CMAHPQ9Y471 501 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 LHFPL6Q9Y693 200 aa13.8□□□□□ -0.2
HDHD3-202ENST00000374180 PRRC2AP48634 2157 aaKnown RBP13.79□□□□□ -0.2
HDHD3-202ENST00000374180 VPS13CQ709C8 3753 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 TVP23AA6NH52 213 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 OVOL3O00110 214 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 RER1O15258 196 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 DOK2O60496 412 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 FAM157BP0CG42 384 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 COX5BP10606 129 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 BMP4P12644 408 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 PCSK6P29122 969 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 EPHA2P29317 976 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 RAD52P43351 418 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 BLVRAP53004 296 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 ADAM8P78325 824 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 PLBD1Q6P4A8 553 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 CORO6Q6QEF8 472 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 VASH1Q7L8A9 365 aaPredicted RBP13.79□□□□□ -0.2
HDHD3-202ENST00000374180 CPOQ8IVL8 374 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 PRRG3Q9BZD7 231 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 OR51V1Q9H2C8 321 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 OR51B6Q9H340 312 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 EIF3KQ9UBQ5 218 aaKnown RBP13.79□□□□□ -0.2
HDHD3-202ENST00000374180 CYB5R1Q9UHQ9 305 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 KCNG2Q9UJ96 466 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 ORC6Q9Y5N6 252 aa13.79□□□□□ -0.2
HDHD3-202ENST00000374180 EI24O14681 340 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 GPRIN2O60269 458 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 GGT2P36268 569 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 CDKN1AP38936 164 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 HTR5AP47898 357 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 GTF2A1P52655 376 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-202ENST00000374180 UCP2P55851 309 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 RPS23P62266 143 aaKnown RBP13.78□□□□□ -0.2
HDHD3-202ENST00000374180 HIST1H3AP68431 136 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 CCDC92Q53HC0 331 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-202ENST00000374180 HIST2H3PS2Q5TEC6 136 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 LYPD4Q6UWN0 246 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 HIST2H3AQ71DI3 136 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 LINC00346Q8IVM7 164 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 CBR4Q8N4T8 237 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF511Q8NB15 262 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 PERPQ96FX8 193 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 C9orf16Q9BUW7 83 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 ZNF701Q9NV72 531 aaPredicted RBP13.78□□□□□ -0.2
HDHD3-202ENST00000374180 ITPR3Q14573 2671 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 CELSR1Q9NYQ6 3014 aa13.78□□□□□ -0.2
HDHD3-202ENST00000374180 ZAR1LA6NP61 321 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 B9A039 149 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 SYNGR3O43761 229 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 GLCEO94923 617 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 ALPLP05186 524 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 LCKP06239 509 aa13.77□□□□□ -0.21
HDHD3-202ENST00000374180 POLR2IP36954 125 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms