RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.81□□□□□ -0.2
GTF3C5-204ENST00000372108 SLC6A15Q9H2J7 730 aa13.81□□□□□ -0.2
GTF3C5-204ENST00000372108 ZCCHC4Q9H5U6 513 aa13.81□□□□□ -0.2
GTF3C5-204ENST00000372108 GPR171O14626 319 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 OCM2P0CE71 109 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 NTF4P34130 210 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 SOX2P48431 317 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 CCL11P51671 97 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 ZNF133P52736 654 aaPredicted RBP13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 HYAL4Q2M3T9 481 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 OR10S1Q8NGN2 331 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 KCTD12Q96CX2 325 aaKnown RBP13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 ZNF845Q96IR2 970 aaPredicted RBP13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 POLE4Q9NR33 117 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 CENPMQ9NSP4 180 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 FOXD3Q9UJU5 478 aaPredicted RBP13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 AK6Q9Y3D8 172 aaKnown RBP13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 FLVCR1Q9Y5Y0 555 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 R4GMQ9 66 aa13.8□□□□□ -0.2
GTF3C5-204ENST00000372108 PFDN1O60925 122 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SLC2A2P11168 524 aaPredicted RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 NR2C1P13056 603 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 PPIAP62937 165 aaKnown RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 C10orf128Q5T292 105 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 ABLIM2Q6H8Q1 611 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 FAM131AQ6UXB0 335 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CFAP77Q6ZQR2 320 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 ZFP62Q8NB50 900 aaPredicted RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 GPR148Q8TDV2 347 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SLAMF6Q96DU3 332 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SCMH1Q96GD3 660 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 GFI1Q99684 422 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SLC25A18Q9H1K4 315 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 C1orf198Q9H425 327 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 GTF2A1LQ9UNN4 478 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 EMC9Q9Y3B6 208 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 TRBV5-7A0A0A0MS05 114 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 FABP12A6NFH5 140 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 NOTOA8MTQ0 251 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 H3BSH0 61 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 MAGEB3O15480 346 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 H2BFMP0C1H6 154 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 EPXP11678 715 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 EVX1P49640 407 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CLDN18P56856 261 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CNIH2Q6PI25 160 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 C20orf196Q8IYI0 205 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 FDCSPQ8NFU4 85 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CPNE4Q96A23 557 aaPredicted RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SOSTQ9BQB4 213 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CCDC32Q9BV29 185 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 SRRQ9GZT4 340 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 TIGARQ9NQ88 270 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 GDF2Q9UK05 429 aaPredicted RBP13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 CSAG2Q9Y5P2 127 aa13.79□□□□□ -0.2
GTF3C5-204ENST00000372108 ANKRD61A6NGH8 418 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 MAPK3P27361 379 aaPredicted RBP13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ARPC4P59998 168 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 SRYQ05066 204 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ZNF766Q5HY98 468 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 PDSS1Q5T2R2 415 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 INTS12Q96CB8 462 aaKnown RBP13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 G6PC2Q9NQR9 355 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 C14orf119Q9NWQ9 140 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 FBXO9Q9UK97 447 aaPredicted RBP13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ZFHX4Q86UP3 3567 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ISPDA4D126 451 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 CYTIPO60759 359 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 PAHP00439 452 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ITGB2P05107 769 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ZNF708P17019 499 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ATF1P18846 271 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 TNFSF10P50591 281 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 OXA1LQ15070 435 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ZNF544Q6NX49 715 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 XKRXQ6PP77 449 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 FOXL2NBQ6ZUU3 175 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 FCRLAQ7L513 359 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 OR2AJ1Q8NGZ0 328 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 ASH2LQ9UBL3 628 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 RCE1Q9Y256 329 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 POLR1DQ9Y2S0 133 aa13.78□□□□□ -0.2
GTF3C5-204ENST00000372108 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.2
GTF3C5-204ENST00000372108 PTPRZ1P23471 2315 aaPredicted RBP13.77□□□□□ -0.2
GTF3C5-204ENST00000372108 TMEM269A0A1B0GVZ9 245 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 DHHO43323 396 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 SLC19A2O60779 497 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 RAF1P04049 648 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 ELK1P19419 428 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 AZGP1P25311 298 aaKnown RBP13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 APEX1P27695 318 aaKnown RBP13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 CDC20Q12834 499 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 MADCAM1Q13477 382 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 SGCAQ16586 387 aa13.77□□□□□ -0.21
GTF3C5-204ENST00000372108 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms